Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MGLSDWFSEFCSSIQVQDGGTISTRYKNITSRLNTDFWNTTSDTSHSLYVGSYGRNTAIQGFSDLDMIFRLPYSEYEKYNNYSGNGQSAMLQAVKTSIEKTYSTTSIRADGQVIVVPFNDGISFEVVPAFNNKNDSFTYPDANNGGSWKVTNPKPEIQAIRDRN |
1 | 6e0kA1 | 0.15 | 0.13 | 4.50 | 1.77 | SPARKS-K | | PVPESQLERWS---HQGATTTAKKTHESIRAALDR--YKWPKGKPEVYLQGSYKNSTNIRGDSDVDVVVQLNSVFMNNLTAESDYTWNDFYSDVERALTDYYGASKVRRGRKTLKVET-TYLPADVVVCIQYEDDYMTFYVPSEDRWVVN-------------- |
2 | 2dr5A1 | 0.18 | 0.12 | 3.99 | 1.64 | FFAS-3D | | MKVEEILEKALELVIPDEERKGREAEEELRRRLDE-------LGVEYVFVGSYARNTWLKGSLEIDVFLLFP----------EEFSKEELRERGLEIGKAVLDSYEIRAEHPYVHGVV-KGVEVDVVPCYKL-------------------------------- |
3 | 4xj6A | 0.14 | 0.14 | 4.77 | 1.86 | HHpred | | WDFNNYYDGLISKLKLSKSDKLKALRQIVRERTRDVFQEAIKFQPRFWTQGSFQYDTLNRPFHDIDDGTYMPMTVFES-E--PSIGHTLLLLLVDTSLKSLNDGWVFEEKNTCGRIKIYRKTHIDVMYAIPKEVDKVNLALREGVRRWSVSDPKIVEDWFNESC |
4 | 6e0mA | 0.16 | 0.15 | 4.89 | 1.75 | MUSTER | | NFSEQQLINWSRPVSTTEDLKCQNAITQITAALRAKFGN----RVTIFLQGSYRNNTNVRQNSDVDIVMRYDDA-----FYPDLYNFDELKADTEEALRNVFTTS-VERKNKCIQVNGNSNITADVIPCFVLKRFAEGIKFYSDDNKEIISFPEQHYSNGTEKT |
5 | 4xj1A | 0.13 | 0.13 | 4.41 | 1.32 | CNFpred | | EIIQEKVSTTIKHLSDSEQREVAKLIYEMDDDARDEFLGL---TPRFWTQGSFQYDTLNRPEMDIDDGTYMPMPIFESEPK---IGHSLLILLVDASLKSLVHGWKFEAKQTCGRIKIEEKTHIDVPMYAIPK-ENVNLALREGDRKWINSDPKIVEDWFNDSC |
6 | 4txyA | 0.15 | 0.15 | 4.90 | 1.62 | HHsearch-2 | | WNFHQYYTGLMGKLVLTDKNNLKALRKIIRLRTRDVFEEFLGLTPRFWTQGSFQYDTLNRPFMDIDDGTYMPMPI---------IGHSLLILLVDASLKSLNHGWKFEAKQTCGRIKIEAKTHIDVMYAIPKDSENVNLALREGDRKWINSDPKIVEDWFNDSC |
7 | 6e0mA2 | 0.20 | 0.16 | 5.09 | 1.78 | Neff-PPAS | | ---------------TTEDLKCQNAITQITAALRAKFG----NRVTIFLQGSYRNNTNVRQNSDVDIVMRYDDA-----FYPDLYNFDELKADTEEALRNVFTTS-VERKNKCIQVNGNNRITADVIPCFVLKRFSTLQSVEAEGIKFYSDDNKEIIS------ |
8 | 4txyA | 0.16 | 0.15 | 4.89 | 2.55 | HHsearch | | WNFHQYYTGLMGKLVLTDKNNLKALRKIIRLRTRDVFEEFLGLTPRFWTQGSFQYDTLNRPFMDIDDGTYMPMPI---------IGHSLLILLVDASLKSLNHGWKFEAKQTCGRIKIEAKTHIDVMYAIPKDSENVNLALREGDRKWINSDPKIVEDWFNDS- |
9 | 1r89A1 | 0.16 | 0.12 | 3.87 | 1.29 | PROSPECTOR2 | | MKVEEILEKALELVIPDEVRKGREAEEELRRRLDEL-------GVEYVFVGSYARNTWLKGSLEIDVFLLFP----------EEFSKEELRERGLEIGKAVLDSEIRYAEHPYVHGVV-KGVEVDVVPCYKLKEPK-------------------------NIK |
10 | 4txyA | 0.16 | 0.15 | 4.89 | 1.65 | SAM | | -NFHQYYTGLMGKLVLTDKNNLKALRKIIRLRTRDVFEEFLGLTPRFWTQGSFQYDTLNRPFQDIDDGTYMPMPI---------IGHSLLILLVDASLKSLNHGWKFEAKQTCGRIKIEAKTHIDVMYAIPKDEENVNLALREGDRKWINSDPKIVEDWFNDSC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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