Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ENTEQFIEDKYPVDIRYGLKIDCEVSQNGFREHFLTEMLAKRIPLLAKKKLLFTISENNVPEPYSIEWKVLNRGEEAKKRNCIRGQIVSDDGQHKRKESTNFKGDHIVECFVIKDGVVVAKDRIDVPIR |
1 | 4b9gA | 0.11 | 0.10 | 3.62 | 0.75 | SPARKS-K | | DSAVRIIPVNYDSDPKLNYTVEMTIPAGVSA----------VKIVPTDSQQIGKLVNVNNPD-QNMNYYIRKDGA--GKFMAGQKGSFSVKENTSYTFSATYAGHLTVSFYSNDNKTEIATKNFPVSTT |
2 | 5vhvA2 | 0.13 | 0.09 | 3.25 | 0.65 | FFAS-3D | | ---------------KAEVKIHHLMVTPAV--------------INLGERINLSFTTAPAPQKLVVDYAIDYTGHGAAKVFKLKAFSLGAGAQQHIRREQHYPGRHVVHVLV--NGERLGSAEFEL--- |
3 | 5vhvA | 0.11 | 0.09 | 3.10 | 0.32 | HHpred | | ---------LMGAGAKAEVKIHH--------------LMVTPAVINLGERINLSFTLESAPQKLVVDYAIKSTGHGAAKVFKLGGAQQREQHIRDMTTRKHYPGRHVVHV--LVNGERLGSAEFELRA- |
4 | 2xwxA2 | 0.18 | 0.12 | 4.05 | 0.77 | MUSTER | | -------------QPEYSLTVS----------------LAKEYEIGEQPQLDLTLEAQ---GEMSAELTVYNH------HQKPLASWSQATDGELKSITLELSGHHMLVSRIKRDGNLQDQQTLDFMLV |
5 | 4d93A | 0.11 | 0.09 | 3.33 | 1.00 | CNFpred | | -----------------QLGINFNAVDGFFFYEDVNKVET-----VTDAYIKLELKSPIKNKLMRFMVTCTERMTFFVYYVMSKGNIIDA-KQTKYLLQLNMIPKAKILIATVAGRTVVYDY-ADLDFQ |
6 | 2q3zA3 | 0.08 | 0.05 | 1.81 | 0.54 | HHsearch-2 | | -----------------------------------------------GMAMRIRVGQSMMGSDFDVFAHITNNTAEEYVCR-----------LLLCARTVSYNGILGPECGTKLLNLTLEEKSVPLCIL |
7 | 4qpwA | 0.11 | 0.10 | 3.64 | 0.69 | Neff-PPAS | | ---EEVKETTTIGKNDTEGCLEIKTSVAASQNHFIQYHTADNLPIEIGKEYKLKMMVR-GSAEGKLNFGVGP------WSGRAEGSFSFNTEWKEYEFSFKAVADGHVMTQSGLFVGTIQIKYVKITHS |
8 | 5vhvA2 | 0.11 | 0.09 | 3.06 | 0.54 | HHsearch | | --------------AKAEVKI--------------HHLMVTPAVINLGERINLSFTLESAPQKLVVDYAIDSTGHGAAKVFSLGGAQRREQHIRDMTTRKHYPGRHVVHVL--VNGERLGSAEFELRA- |
9 | 3juyB | 0.10 | 0.09 | 3.15 | 0.76 | SP3 | | EWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG--------------------TDFTLTIT |
10 | 4b9gA | 0.11 | 0.10 | 3.67 | 0.56 | PROSPECTOR2 | | DIDSRIIPVNYDSDPKLNYTVEMTIPAGVSAVKIVP-----TDSLTSSGQQIGKLVNVNNPDQ-NMNYYIRKDSGAGKFMAGQKGSFSVKENTSTGGEYPNYAGHLTVSFYSNDNKIATKNFPVSTTIS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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