Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MQAETILEGLEAGLPQAVSSGLSLVPAPGLVLTCLSAPSGPGGMALEPPPTTLRKAFLAQSTLLESTLEGAPEWAAPHPEEQRRSPPACSQHTPPLPSTPTGPPPCSPGGNHPLCALSGRGGGRCSIPSLSSSSTFSLFSSGCWNPRVKLRVRKSQSQGRAGQLI |
1 | 4btgA | 0.13 | 0.13 | 4.60 | 0.87 | SPARKS-K | | PNFYALVDCVRASMLTALSSVDSGALAPALILANAATTAFERSRGNFDANAVVSSVLTILGRLWSSTPKELDPSARLRNTQRGRAEVIFSDEELSSTIIPWFISEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFL |
2 | 3mcmA3 | 0.16 | 0.07 | 2.42 | 0.50 | FFAS-3D | | IHNDNVCDYIEQKKQILLKHGIAIYFDIGFALVGHSRKPSVLGLTKDSNLATLDRATRELSRKL---EKLDIDIIRVH--------------------------------------------------------------------------------------- |
3 | 1m6yA | 0.28 | 0.13 | 3.90 | 0.31 | HHpred | | FQANRELENLKEFLKKAEDL-----LNPGGRIVVISFHSL---------EDRIVKETFRNSKKLR---ILTEKPVRPSEEEIRENPRARSGRL------------------------------------------------------------------------ |
4 | 4k0mC | 0.10 | 0.10 | 3.59 | 0.85 | MUSTER | | RRSDQNVRG-TVSLPHGLGKQVVLAIAKGEKIK-EAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- |
5 | 5euhA | 0.11 | 0.04 | 1.32 | 0.71 | CNFpred | | QAGDQALRELARVITTNVRRPADLVAREEFSVILAET-----------DSVGAQQIAEHIRAAVEQL-------------------------------------------------------------------------------------------------- |
6 | 1wg8A | 0.27 | 0.13 | 4.10 | 0.48 | HHsearch-2 | | IYVNDELNALKEFLEQAAEV-----LAPGGRLVVIAFHSL---------EDRVVKRFLRESGLK----VLTKKPLVPSEKEAAQNPRARSAK---------------------------------------------------------LRAAEKEA-------- |
7 | 3jbmA | 0.13 | 0.13 | 4.41 | 0.94 | Neff-PPAS | | -TNDVHLSGMS--RISQAVLPAGTGTDGYVVVDATIVPDLLPRLGHAARVETLE--FEIQPMCPANTGGGYVAGFLPDPTDNDHTFDALQATRGAVVAKWWESRTVRPQYTRTLLWTSSGKEQRLTSPILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPEETTA |
8 | 1m6yA3 | 0.28 | 0.13 | 3.90 | 0.43 | HHsearch | | ------LENLKEFLKKAED-----LLNPGGRIVVISFHSL---------EDRIVKETFRNSKKLR---ILTEKPVRPSEEEIRENPRARSGR---------------------------------------------------------LRAAERI--------- |
9 | 1iirA | 0.12 | 0.12 | 4.08 | 0.55 | SP3 | | VVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPIDIPAQWERNNQSAYQRYGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTG--AWILPDERPLSPELAAFLDAGPPPVYLGFGAPADAVRVAIDAIRAHGR--RVI |
10 | 4k0mC | 0.08 | 0.08 | 3.12 | 0.82 | PROSPECTOR2 | | KVYTIDEAARTASLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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