Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MATSERRIYSMESMAPEISEDIGCLLAYMKESVCVLLISQSFFSCVAEMYIPDMNRPGKAERRAEKGLRPPRELAGETRRLQSWPTLARWLRRVSFSLYKPSIQAAPEPDPGNWAKSPRLSLGPEGITKGKHGFKFQGIKEKFNVSKKVLKMTFL |
1 | 4btgA1 | 0.15 | 0.14 | 4.77 | 0.75 | SPARKS-K | | VGKGNRLFYAQAGGALSVDELVNQFTEYHQSTACN----PEIWRKLTAYITGSSNRAIKAD---AVGKVPPEQLRTLASEHELFHHITTDFVCHVLSPLGFI---LPDANFYRASDLRRMALSSVDSKMLQATFKAKGALAPALISQHLANAATT |
2 | 1xg5C2 | 0.14 | 0.09 | 3.08 | 0.37 | FFAS-3D | | RNVDDGHIININSMSTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVA----------EAVIYVLSTPAHIQIGDIQMRPTGS--------------------------------------------- |
3 | 4ptsA | 0.17 | 0.15 | 4.86 | 0.29 | HHpred | | ---ATGEVVTNDF--PQITIDFSLELYPEHLRAEIDEVSKGIYTEVNGVYFAGGDTITEADVRLFTTLDAYHGHFKCRSKLSEMPVLWAYARDLFQTPFNPTQIVPKGPDLRNWLPHHREELGGRPFGDGTPPGPPIA----------------- |
4 | 6em5l | 0.11 | 0.10 | 3.52 | 0.69 | MUSTER | | MTEEETKV-----VFEKLAGYIGRNISFLELPHVFRLQKDRVY-YVPDHVAKLATSVAR-PNLMSLGIC----KFTKTGKFRLHITSLTVLAKHAKYKIWIKPNGEMPFLYGNHVLKAHVGKMSDDIPEHAG-FAMNDV--VSAKSTSESRNMQP |
5 | 4wshA | 0.09 | 0.05 | 1.70 | 0.59 | CNFpred | | ---------------GYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSKDFRKSKAMLYDNPKAMHALLDK-----LAQSVTSYLNGQI------------------------------------------------------------ |
6 | 2pffB | 0.18 | 0.16 | 5.26 | 0.64 | HHsearch-2 | | SNTPDKDYLLSIFTPGELRSYLKGGDSWESFFVSVKAITVLFFIGVRCYAYPNTSLPSILEDSLENNEGVPSPMLSISNLTQEQVQVNSHLPAGK--QV--------EISLVNGAKNLVVSGPPQSLRKAKAPSGLDQSR----IPFSERKLKFS |
7 | 1w9rA | 0.11 | 0.08 | 3.02 | 0.76 | Neff-PPAS | | -HMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPT-NTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP------------------------------------ |
8 | 1jyoA | 0.11 | 0.08 | 3.05 | 0.38 | HHsearch | | -------LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDI-----FTSIEAK--DDIWLLNGMIIPLSPV------C---GDSIWRQIMVINGELANEGTLAYI--DAAETLLLIHAITD--LT-N----TYHIISQLESFVNQQEALKNIL- |
9 | 2yjnA | 0.10 | 0.10 | 3.78 | 0.59 | SP3 | | MQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTTPLLWGPDITTRARQNFLGLLPDQPEEHREDPLAEWLTWTLEKYGGPAFD-EEVVVGQWTIDPAPAAIRLDTGLKTVGMRYVDYNGPSVVPEWLHDEPERRRVCL |
10 | 3qc7A | 0.11 | 0.11 | 3.96 | 0.60 | PROSPECTOR2 | | ISIEVEDIKDAGDTGKRLLKINTPSGAIIIENEDAKALINGETTNTNKKNLQDLLFSDGNVKAFLQATTTDENKTALQQLLVSNADVLGLLSGNPTSDNKINLRGAGVPYSLPAATTTTLGGVKKGAAVTASTATDVATAVKLITVLKNAGIISL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|