Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MGLKVGFQGGGSFRKDALWLEGGVSARWARAPHSAPLRPPRELHAAPPSATPTQTVMRPAGFPRRTRLMVRSAPPTQRPPTGSGCVSGLWRKGLGLRPQTLLRVGGVVLSSAPALRPRLGPGLRPRTS |
1 | 3l6wA | 0.06 | 0.06 | 2.66 | 0.78 | SPARKS-K | | AGSFVILKEMPWAYERLYRFDETVHNLNLTDDRFDLKKYDHT--ELDASVLPAPIIVRRPN-NAVFDIIEIPIGKDVNLPPKVVVKRGTKIMFMSVDEAVTTPMLNLGMFKCKVPPFSFHAFELGKMY |
2 | 2h6oA2 | 0.28 | 0.20 | 5.98 | 0.38 | FFAS-3D | | -----------------------------NATYSVPM------VTSEDANSPNVTVTAFWAWPNNTETDFKKWTLTSGTPSGCENISGAFASGLGTAPKTLITTHKVIFSKAPE-STTTSPTLNTT-- |
3 | 2rirE1 | 0.12 | 0.09 | 3.05 | 0.20 | HHpred | | TGLKIAVIGGDARQLEIIKLEQQADILVGFDQLDHGF------T-------GAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVLKDHL-D--RTPA------HCVIFSGISNA------------- |
4 | 6nn3A1 | 0.14 | 0.14 | 4.78 | 0.82 | MUSTER | | -CSQHFYEMYNPLYGSRLGVPLGGDPKFRSLTHEDHAIQPQNFMPGPLVNSVSTLTGLSTGTSQNTRISLRPGPVSQPYVTGINAISHGQGVGRFPNEKEQLKQLQGLNMHQIERPLMVGSVWNRRA- |
5 | 5hxkA | 0.23 | 0.10 | 3.18 | 0.45 | CNFpred | | ---------------AILAVAGGVSWERLRLEPFLAWEGEEALYPAPELSEPHRFVLRRP--QVQIGLAYPDV------------------------------------------------------- |
6 | 1qxnA | 0.11 | 0.09 | 3.09 | 0.35 | HHsearch-2 | | NPDITLID----VRDPDELKAMGKVKNYKHMSRGKLEP---LLA--------------KSGLDPEKPVVVFCKTAA-----RAALAGKTLR-EYGFKTIYNSE-GGMDWL--EEGLPSLDRSHHHHHH |
7 | 6ic4A | 0.08 | 0.07 | 2.82 | 0.87 | Neff-PPAS | | SGVTIGRSITLDPVTRLATVTFDLDGKLTSFNAEQLKEVQ-KNALDELRYSSDYTQATPAQQKTMEQQLISNMNSITSIDEDAYIM---------VATNGLLGEKYLKIVPGGGLNYLKRGDTISNTQ |
8 | 1uw4A | 0.15 | 0.07 | 2.38 | 0.46 | HHsearch | | ----------------------------------------------------------------LSKVVIRRLPPTLTKPMPEHDYFE-FFSNTSLYPHMYAR-AYINFKNQEDIILNKGQEYPAIV- |
9 | 2mcdA | 0.14 | 0.10 | 3.48 | 0.57 | SP3 | | ----------------------MRGSHHHHHHGSVSFGAPSPLSSESEDEINYMTPPEQEAQPGALAALHAEGPLAGLPVTRSDARVLIFNEKKSEPWLRLDMSDKAIFRRYPHLR------------ |
10 | 1jvr | 0.12 | 0.11 | 3.85 | 0.64 | PROSPECTOR2 | | HMGQIHGLSPTPIPKA----PRGLSTHAAYRLQPGPSDFDFQQIWLNPIDYSLLASLIPKGYPGRVVEIINKNQVSPSAPAAPVPTPICPTTTPPPPPPP---------SPEAHVPPPYVEPTTTQCF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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