>PF17667 (409 residues) KLDMFLASTDAVLLSGEHDWSNVLIIGEHKQNPDDDGSTKTLVQLAGYVREVFGSQPERR FVPGFTICGSIMRLWVSDRSGSYNSEKFDVHKEPERFIRVIAGYALMTDAELGLNTFVKH DSNGKYIVARDVKISLEDKPIASTKAIVCRGTTCYRGRRSDSTEWDYVVKFAWPSDKRQR EGELLKLAKERGVTGIATWFNHKQIVIDGDPDTTSHFRRDMKFGRPRKLSSKASWVDGSP ESSRAIQETVVDSLAHCRNEWQRNNVDCIQEAGVDSFTDCESETYDNRVNYCLVTSPAGR PLREYHSVRELLEVLRDAIRGHRSLLEDGKILHRDISENNIIITELPAEGDPKGRLIDLD LAKELDSMPSGARHRTGTMQFMAIEVLEGNGHTYRHDLESFFYVFLWMC |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KLDMFLASTDAVLLSGEHDWSNVLIIGEHKQNPDDDGSTKTLVQLAGYVREVFGSQPERRFVPGFTICGSIMRLWVSDRSGSYNSEKFDVHKEPERFIRVIAGYALMTDAELGLNTFVKHDSNGKYIVARDVKISLEDKPIASTKAIVCRGTTCYRGRRSDSTEWDYVVKFAWPSDKRQREGELLKLAKERGVTGIATWFNHKQIVIDGDPDTTSHFRRDMKFGRPRKLSSKASWVDGSPESSRAIQETVVDSLAHCRNEWQRNNVDCIQEAGVDSFTDCESETYDNRVNYCLVTSPAGRPLREYHSVRELLEVLRDAIRGHRSLLEDGKILHRDISENNIIITELPAEGDPKGRLIDLDLAKELDSMPSGARHRTGTMQFMAIEVLEGNGHTYRHDLESFFYVFLWMC | |||||||||||||||||||
1 | 2csnA | 0.20 | 0.09 | 2.73 | 1.16 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------VIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQE----------------------------------------------------------------------------------GLHNVLVIDLLGPSLEDLLSVKTVAMAAKQMLARVQSIH-EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF- | |||||||||||||
2 | 6n2cA | 0.08 | 0.07 | 2.89 | 0.82 | MUSTER | FTTYGLFSSDKFNNNITVTTRNMYSSSDITLRSDNNRPGDYTIKADNIIGSFIFGGNNKVVVNNLMYTKNGITFRLESNSLLFSDGTISLSGKDEIVANAL--FCDTLDIRNGSSNLVTINE---FAYFNKLNIW-TDKMVLKSNSKLFGGDIEIILSADVGTVVYANNLDIIGSSATIDAPDTVLYCNNLKIDGEVKLNVKKIVCSGTITISNLNSGTNIRVSDKIECRSIPQNIPRNLFVQNPNVNFQIPYPTIPAIIEEIKKNTFPTNWIRLDNIVEDKKDINGANYYSLVSTG-----QNSNDINEIFNKNK------PNNPHSNVQIFV-ITKSGINVP--PDQNHLDGVLIA---SLQFNGGNLNIEYVRMPQPLIDYLLSKNVQPPV--------------- | |||||||||||||
3 | 2v62B | 0.17 | 0.08 | 2.72 | 1.70 | HHpred | ------------------------------------------------------------------------------------------------------------------------FPEGKVLDMEGNQWVLG-KKI-------G---LIYLAFPTNKPDARHVVKVEYQEGPLFSELKFYQRVAKLDYLGIPLFYGSGLT------------------------------------------------------------------------------EFKGRSYRFMVMERLGIDLQKISKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKN---PDQVYLADYGLSYRYCPNGNPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL | |||||||||||||
4 | 3bkbA | 0.16 | 0.11 | 3.67 | 1.23 | Neff-PPAS | ---------EVQKPLHEQLWYHGAIP-------------------RAEVAELLVHSGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPS-----IPLLIDHLLSTQQPLTSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGN------FGEVFSGRLRA-DNTLVAVKSCRETLPPDLKAKFLQEARILK------------------------------------------------------------------------------QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTE-----KNVLKISDFGMSREEADGVYAASGGLVPVKWTAPEALNYGRYSSESDVWSFGILLWETF | |||||||||||||
5 | 3sv0A | 0.23 | 0.09 | 2.92 | 1.56 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------EIYLGTNIQ-TNEEVAIKLENVK-QLLYESKIYRILQ--GGTGIPNVRWFGVEG----------------------------------------------------------------------------------DYNVLVMDLLGPSLEDL-SLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAKKYRIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFL | |||||||||||||
6 | 4xh0A | 0.19 | 0.09 | 2.76 | 0.44 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------LRVG--RKFRIG-R-------KIG---DIYHGTNLIS-GEEVAIRLESIRSRHDYESRVYKYL--SGGVGIPFIRWFGRE------G----------------------------------------------------------------------------EYNAMVIDLLGPSLEDLFSFKTVIMLALQMICRVQYIHGRS-FIHRDIKPDNFLMGVGR--RGSTVHVIDFGLSKKYRDFNTENKSLTGTARYASVNTHLGIEQSRRDDLESLGYMLIYFC | |||||||||||||
7 | 2v62B | 0.18 | 0.09 | 2.85 | 0.67 | HHsearch | ------------------------------------------------------------------------------------------------------------------------FPEGKVLDMEGNQWVLG-KKI---------G-LIYLAFPTNKPEARHVVKVEYQEGPLFSELKFYQRVAKLDYLGIPLFYGSGLTE------------------------------------------------------------------------------FKGRSYRFMVMERLGIDLQKISKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKN---PDQVYLADYGLSYRYCPNGNHRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRW- | |||||||||||||
8 | 4oliA | 0.12 | 0.10 | 3.56 | 1.20 | HHpred | ----------------EGRLRV-ELRVVLKVLDPS--HHDIALAFYETASLMSQSHTHLAFVHGVCVRGPEIMVTEYVEHGPLDVGHVPMAWKMVVAQQLASALSYLENK--NLVRNILLARLGLA-EGTSPFIKLSDLGALSRE--ERVERIPWLAPECLPDGLATLTSQCLTYTQRPSFRTILRDLTRLQPPTVRYLKKIRDLG-EG-------------------------HFGKV-SLYCYDGTGEMVAVKALHRSGWKQEIDILRTLYHEHIIKYGCCEDQGEKSLQLVMEYVLGSLRDYIGLAQLLLFAQQICEGMAYLHSQH-YIHRNLAARNVLLDN-------DVKIGDFGLAKAVPEGHEVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL- | |||||||||||||
9 | 2v62B | 0.17 | 0.08 | 2.57 | 1.14 | SAM | ---------------------------------------------------------------------------------------------------------------------------------------------------------IYLAFPTNKKDARHVVKVEYQEGPLFSELKFYQRVAKKDCIK--KWIERKQL----------------D------------------------------------------------YLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKN---PDQVYLADYGLSYRYCPNGNPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL | |||||||||||||
10 | 4y93A | 0.13 | 0.09 | 3.16 | 1.20 | Neff-PPAS | --------GRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPEQ----------ISIIERFPYPFQVVYDEGPLYVFSPT----------EELRKRWIHQLKNVIRYNSDLVQYHPCFWIDGQYLCCSQTAKNAMGCQILAAPSTAGLGYGGVVKYGKWR--GQYDVAIKMI--------------------------------------------------------------------------------KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND-----QGVVKVSDFGMTRYVLDDETSSTGSKFPVKWASPEVLMYSKFSSKSDIWAFGVLMWEIY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |