>PF17658 (343 residues) MIRERENGCQKIRKEEAKDSRAHERKIAEGKPNKNGKPVRTFHTSDSFQDKDFLCFQGDL GSASLLGIWTKLCKSDPRIALGKYSPLEKELLRLGGTHTVAARRFLNYKQEEEWKMLKEL QLLSPDYKQAMAYKKQHSIPCTACGPLEKIWTAKVIVPPEEFKMPQRERLNISKHIERMQ FARALRNKQLLPYIERYRSSSFLSGGGLGPTAKDKAGRDEDDADSDGCDDAKPEERDEAE NKTTKRQEIKMDVIFKSEEPKKHLTYHGNDRKPFFPTKKVERSITGLTNRNLFHLAEFPG DLMLMNQDFISRGGHSSGAMKANRLEEDSVWKEHMCKAACHRY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MIRERENGCQKIRKEEAKDSRAHERKIAEGKPNKNGKPVRTFHTSDSFQDKDFLCFQGDLGSASLLGIWTKLCKSDPRIALGKYSPLEKELLRLGGTHTVAARRFLNYKQEEEWKMLKELQLLSPDYKQAMAYKKQHSIPCTACGPLEKIWTAKVIVPPEEFKMPQRERLNISKHIERMQFARALRNKQLLPYIERYRSSSFLSGGGLGPTAKDKAGRDEDDADSDGCDDAKPEERDEAENKTTKRQEIKMDVIFKSEEPKKHLTYHGNDRKPFFPTKKVERSITGLTNRNLFHLAEFPGDLMLMNQDFISRGGHSSGAMKANRLEEDSVWKEHMCKAACHRY | |||||||||||||||||||
1 | 5yfpE | 0.05 | 0.05 | 2.25 | 1.04 | SPARKS-K | LLENFNSAYRENNFTKLGGVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVI-IETSMQNKNESKIVKRVFEEKATHVIQLF--IQRVFAQK--IEPRFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYLLEIDDSNQ----------------ILSTTLEQCFADLFSHFGIEKRSLEAILVDMTSKFTVNYDINKRVLLDKYKEKLSTNTASDIDNSPNSCVVESTARVMELIPNKA---------HLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDINKTAGVVNLNFLKFISMSTEILDLKSIFLPLLNNSPEIKAQIIEMTNSQIQ | |||||||||||||
2 | 5yz0C | 0.12 | 0.11 | 3.85 | 1.17 | Neff-PPAS | -------GTSAPGSKRRSEPPAPRPGPPPGTGHRGFSAAAAPDPDDPFGAHGLSQCPAAARDVSSDHKVHRLLDGMSKNPSGRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQAL-------SDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSPQFGKTSFPTKESFSANMSLPHP--------CQTESGYKPLVGREDSKPGDSIKQEEAQKSFVDSWRQRSNTQGSILINLLLKQPLIPGSSSSESPAGTPLQPPGFGSTLAGMSGLRT- | |||||||||||||
3 | 5ugqA | 0.09 | 0.08 | 3.24 | 1.02 | PROSPECTOR2 | AALGVFQTLPKRVHERIWCNSDADNDRLRAEPQVDYSREGVAHIENETKQFVGRCVDKGKNFLAHVGTVNAALGDDKLTAVDPNADPIEAELRQAKGFQDAFNNYAADCAKNAGCPLGADPAKAVEVYHSLVDPLVDPDNPRISRPAR--TKDPRGLSYSDAIVGTIALYSPNLWQHLTDGLSELVDNRGDTLLALADYRRDSHGRYNNSGDARVAINCVDQPPVTDRDKVIDEDRRAREIAPFSYG--------KFTGDAPLGTCAFWPVPPTSQPHAVSAPGLPATPYKAGVANQLRGSLLTFDGTQTVVFQGDSCIDEYV----TAYLIGGTTPPSGAKC | |||||||||||||
4 | 5yz0C | 0.09 | 0.08 | 3.08 | 0.87 | SPARKS-K | GPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADD--LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKKDNFELEVLQAQYKELKEKMKVMEEEVLTESVLEEQRHFLLEQEKTQADKEKEFSK------KLQSLQSELQFKDAEMNELRTKRANKLAAPSVSHVSPRKNPSVKPEACSPQFGKTSFPTKESFSANMSLPHPCQTESGYVGREDSKPHSLRGDSIKQEEA-----------QKSFVDSWRQRSNTQGSILINLLLKQPLISL-------------------CHLLSSSSESPAGTPLQPPGFGSTLAGMSGLRT---- | |||||||||||||
5 | 5j9qD | 0.09 | 0.03 | 1.10 | 0.57 | FFAS-3D | --------------------------------------------------------------------------------------LEQTIQDVSNLPSEFRYLLIGSNDLKLIEEKKKYEQKESQIHKFIRQQGSIPKHPQEDGLDKEIKESLLKLQREKCVLANTALFLIARHLNKLEKNALLEEDGVLA------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5mrc1 | 0.13 | 0.09 | 3.03 | 0.39 | HHpred | ------------------------------------------------------------------HIWSDFTTRPS--SLSIQSSVKNYLFQSLDPPSIMSYDFLEQRSSKFYELANKTKN--PLKKDALLIKAEINNP-------EVQYNF---------QFNVKDIIDYDVPVYRHLGKQHWESYGQMLLMQRLETLAAIPDTLLVPRAEVNIKFPFSTKWIEPGEFLSS-------NVTSMRPIFKIQE-YELNVEKQLYTVNPDVPDLSNDS-FKTANINLTKQRFVVWVFRQPLIEDKQDRKELSDDFDIRQFTKKYNLT----------------- | |||||||||||||
7 | 3tnfB | 0.12 | 0.11 | 3.95 | 0.72 | MUSTER | -LDEYEQAIKRA-QENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGEKLLTDSEELSLSEINEKMEAFSKD--------SEKLTQLMEKHKG--DEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINQEVVEHEGQFYLLQKGQKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHKHNG-EKGEEVTSLNDAHYVIGKDQQLFNLGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFLQYEMTVKKLVHHNKGLETTIHKERVEETKQQLE | |||||||||||||
8 | 5a6bA | 0.11 | 0.04 | 1.38 | 0.47 | CNFpred | --------------------------------------------------------------AQAAETLANIKEKAGNYAY--LFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIAQELPELRSQIEDFH---------ALFSHQWLKENK--VFGLDTVDIRMGGLLQRIKRAESRIEVYLAGQLDRIDELE------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2pffB | 0.17 | 0.16 | 5.15 | 0.88 | HHsearch-2 | SHGSLEHVLLVPTASFFIASQLQEQEPTEGFAADEPTTPAELSSLVQFDQVLNLCLQETTDKKSNSALFRAVGEAQLVAIFGNTDDYFEELRDLYTYHVLV-GDLIKFSAETLSELIRTTLDAEKVFTQGLNILENPSNIPISCPLIGVIVTAKLLFTPGELRSSQG-LVTAVKAITVVRCYEAYPNTSLPPSILED---SLENNEGVPSPMLSISN-------------LTQEQVQDYVNPAGKQVEISLVNGAKSGPPKAKAPSGLDQSRPFS-----ERKLK-FSNRFLPVASPFHSHLLVPA----------SDLINKDLVKNNVSFAKDIQIPVYDTF | |||||||||||||
10 | 2tmaA | 0.11 | 0.09 | 3.25 | 1.13 | Neff-PPAS | -MDAIKKKMQMLKLDKENEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDA----------QEKLELAEKKATDAEADVASL--------NRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI--------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |