Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RALERLQAWPDLTAGPASCGTGRALRSVRDEIVHFHSDRDVDLHLTRRAIQRFQYDLGGSSAIRLVPGSRWVTVHLDCDADVDLLLSLVSIALKTHQARPPADPSSECNFHRVTVLPRAAA |
1 | 2fkiA | 0.12 | 0.11 | 3.81 | 2.46 | SPARKS-K | | ELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVEN-RPAVSLKTSPELAELLRQQHPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL---------- |
2 | 2fkiA | 0.14 | 0.12 | 4.25 | 1.33 | FFAS-3D | | ELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEE-------KRKLLV----- |
3 | 2fkiA | 0.13 | 0.11 | 3.74 | 1.42 | HHpred | | ELLQYCMAKPGAEQSV-HNDWKTQIKVEDVLFAMVKEVE-NRPAVSLKTSPELAELLRQQHSDRPSRKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEK----------------- |
4 | 2fkiA | 0.12 | 0.11 | 3.81 | 1.67 | MUSTER | | ELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVEN-RPAVSLKTSPELAELLRQQHSVRPSRKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL---------- |
5 | 2a1vA | 0.14 | 0.12 | 3.93 | 1.43 | CNFpred | | DLRSVCDELPHSLETFPFDDETLVFKVGSRMYALTDIT-QDPLRLSLKVDPERGEELRQAHSIAPGNKKHWVTVTLDGTVPAELLGELLRGSYLLVTKK---------------------- |
6 | 2fkiA | 0.12 | 0.11 | 3.79 | 2.61 | HHsearch-2 | | ELLQYCMAKPGAEQSV-HND-WTQIKVEDVLFAMVKEVE-NRPAVSLKTSPELAELLRQQHSVRPSRKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL---------- |
7 | 2fkiA | 0.13 | 0.12 | 4.04 | 1.63 | Neff-PPAS | | ELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVEAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL---------- |
8 | 2fkiA | 0.13 | 0.12 | 4.02 | 3.66 | HHsearch | | ELLQYCMAKPGAEQSV-HND-WTQIKVEDVLFAMVKEVE-NRPAVSLKTSPELAELLRQQHDVRPSRKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQ-----L----- |
9 | 2a1vA | 0.11 | 0.11 | 3.89 | 1.18 | PROSPECTOR2 | | DLRSVCDELPHSLETFPFDDETLVFKVGYRMYALTDITQDPL-RLSLKVDPERGEELRQAHPQSHLNKKHWVTVTLDGTVPAELLGELLRGSYLLVTKKGFTKAERKELGLPDSLEGGSHH |
10 | 2fkiA | 0.14 | 0.12 | 3.93 | 1.13 | SAM | | -LLQYCMAKPGAEQSV-HND-WTQIKVEDVLFAMVKEVE-NRPAVSLKTSPELAELLRQQSDVRPSRKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLP-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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