Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VHVIVTSSEPFDLSKAEENMVTVEKKLKEFADIEGIAFKQLQELPRTAENVGGKFGVHFTVEGAFERCARVLQFIQAACNEIKEVVSGTVKCGAFEPV |
1 | 6nukA | 0.13 | 0.11 | 3.88 | 0.94 | SPARKS-K | | VRIEIRFTNM-RREEVQKELEKFKERLKELEKRTGS------EIRIEIEERDGEVRVEVEIRNSEEEVRQIIEEIERWVRKMGGELRVEK-------- |
2 | 6nukA | 0.14 | 0.10 | 3.48 | 0.60 | FFAS-3D | | VRIEIRFT-NMRREEVQKELEKFKERLKELEKRTG------SEIRIEIEERDGEVRVEVEIRNSHEEIEEIERWVRKM-------------------- |
3 | 2rjzA | 0.10 | 0.08 | 3.01 | 0.23 | HHpred | | ----------QLPSD--TEVPGLLEDITRTGLGSGLEFEEI---KLLPVAQQFYLPIQISVVG---GYHDLATFVSGVSSLPRTLHDFEIKPVAPTS- |
4 | 6nukA | 0.15 | 0.13 | 4.44 | 0.80 | MUSTER | | VRIEIRFTNM-RREEVQKELEKFKERLKELEKRTGS------EIRIEIEERDGEVRVEVEIRN--SHEEEVRQIIEEIERWVRKMG-GELRVEK---- |
5 | 1q2lA | 0.11 | 0.09 | 3.31 | 0.65 | CNFpred | | ALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPT----------------- |
6 | 4ftfA | 0.14 | 0.08 | 2.81 | 0.36 | HHsearch-2 | | VELMMVYNTDAPTEQLQSAVSSFNKDIRSNL-DVGISYRI------QMRNTRGQLMADQLVTKE--SC------------------------------ |
7 | 6nukA | 0.15 | 0.13 | 4.45 | 0.91 | Neff-PPAS | | STVRIEIRFTMRREEVQKELEKFKERLKELEKRTG------SEIRIEIEERDGEVRVEVEIRNS--HEEEVRQIIEEIERWVRKMG-GELRVEK---- |
8 | 4ftfA | 0.18 | 0.10 | 3.34 | 0.45 | HHsearch | | VELMMVY--NTDANNAQSAVSSFNKDIRSNL-DVGISYRI------QMRNTRGQLMADQLVTKE--SC------------------------------ |
9 | 2lqjA | 0.08 | 0.07 | 2.79 | 0.71 | SP3 | | YQVRVICR--------PKAETYVRAHIVQRTSSNDIT-----LRGIRTGPADDNITLTAHLLMVGHTPAKLERLVAELSLQ-PGVYAVHWYAGEHAQA |
10 | 5cw9A | 0.12 | 0.12 | 4.31 | 0.44 | PROSPECTOR2 | | MEMDIRFRGDDPEAYYKALREMIRQARKEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPPQVILELVKEAIRLAKEFNITVTVLVIRITGVPEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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