Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MIINIGELARVSDKSRSKAAGKLVEVVSIQLKHGVKDEDSEVKVRIIPKDGKSKPQFGYVRAKFLESAFLKAVPAKGIETIDTSHVGVDFKWKLGQAIKFIAPCEFNFIKDDGRVVYTRAMCGYITDQWVEDGVKLYNVVFLGTYKVIPESWIKHYSNALYA |
1 | 4aq1A | 0.12 | 0.12 | 4.33 | 0.65 | SPARKS-K | | DSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTTKTITVNVVNVKADATPVGLDIVAPSEIDVNAPNTASTADDFINFESVEIYTLDSNGNRLKKVTPTATTLVGTNDYVEVNGNVLQFVNVDVTADGTKRIPVKYINSASVPASATVATSPVTVKL |
2 | 2eifA | 0.16 | 0.11 | 3.69 | 0.57 | FFAS-3D | | --LKVGQYVMI--------DGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVPIIDR-------------RKGQVLAIMGDMVQIMDLQTYETLE--------------LPIEGLEPGGEVEYIEAVGQYKIT-------------- |
3 | 2lvmA | 0.12 | 0.08 | 2.86 | 0.28 | HHpred | | MNSFVGLRVVAKWSSNGYF--YSGKITRDVGA-------GKYKLLF------DDGYECDVLGKDILLCD---------------------PIPLDTEVTALSE---------DEY----FSAGVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGN- |
4 | 4aq1A | 0.15 | 0.15 | 4.99 | 0.74 | MUSTER | | DSGNSATDQFVVVATKDKIVNGKVEVKYFKNADTTPTSTKTITVNVVNVKADATPVLDIVAPSEIDVNAPNTASTADVDFINFESVEIYTLDSNGNRLKKVTPTATTLVGTNDYVEVNGNVLQFLTLL-TSSSTVNVDVTADGITKRIPVKYINSASVPASA |
5 | 5t88A | 0.11 | 0.09 | 3.31 | 0.91 | CNFpred | | MFWKDREGERMVFGEGL----TSGYFMSIRKSS-----DGKFAIVTLTY----GWNQGEVYIGPIDNPQ-------EWKKVYSASVPVEAIDVVNGKLYILTKGKIIAIKNGKIDEVIPEGEFPLEWAVIVRDKILAGRLVHASYKLEVYT----------- |
6 | 4ytlA1 | 0.10 | 0.03 | 1.14 | 0.47 | HHsearch-2 | | --FQPGDRIEVLN---GEQRGSKGIVTRTTK--------DIATIKL-----NGFTTPLEFPISTLRKI---------------------------------------------------------------------------------------------- |
7 | 4mboA2 | 0.09 | 0.08 | 3.06 | 0.87 | Neff-PPAS | | TNVKTNVRSRIMKLDDERQTETYITQINPEGKYFASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNY-DSPEFEDVTSQYSYTNGSKITIDWKTNSISST-----------TSYVVLVKIPQSGVLYSTVSD-----INQTYGSKYSYGHTN |
8 | 4ytlA1 | 0.10 | 0.03 | 1.14 | 0.46 | HHsearch | | --FQPGDRIEVLN---GEQRGSKGIVTRTTK--------DIATIKL-----NGFTTPLEFPISTLRKI---------------------------------------------------------------------------------------------- |
9 | 5o60V | 0.15 | 0.09 | 2.91 | 0.72 | SP3 | | MKVHKGDTVLVI---SGKDKGAKGKVLVAYPDRNVLVEGVNRIKKHTAVSGGIVTQEAPIHVSNVMVVDSDGKPTR---------VGYRIDDETGKKVRIANGKDI-------------------------------------------------------- |
10 | 4mboA2 | 0.08 | 0.07 | 2.73 | 0.67 | PROSPECTOR2 | | NSPSVVKTNVRSRIMKLDDERQTETYITQINPEGASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTN-----------SISSTTSYVVLVKIPQSGVLYSTVSDINQTYGSK-----YSYGHTN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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