Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | EELFWGFVAAVKRRWHTVYARTNVDIQYPMAYCVGIQSLSPCKCHVTVVVCLTFLDLRMSAINEATKIMRAFFKTFFYHHGKVPRGRWFKLYRNDWCKDPNLTVGNYIVASGALPLMLGWARSTGLRFSTFTYSDEALWSHRRRDRRLARRREKLENKVSG |
1 | 5cwcA | 0.14 | 0.12 | 4.26 | 0.65 | SPARKS-K | | TEEAREAAREAFELVREAAERA------------GIDSSEVLELAIRLIKECVENAQREGYISEACRAAAEAFKRVAEAAKGITSSEVLELAIRLIKEREGYDISEACAAAEAFKRVAEAAKRAGITSSETLKGNDISEACRQAAEEFRKKAEELKRR--- |
2 | 1uutA | 0.12 | 0.11 | 3.75 | 0.58 | FFAS-3D | | TLVEQPQLTVADRIRRVFLYEWNKFSKQESKFFVQFEKGSE-YFHLHTLV--ETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVKKVVDSGY-IPAYLLPKVQPELQWAWTNLDEY--------KLAALNLEERKRLVAQFLAESSQ---- |
3 | 5d95A | 0.13 | 0.11 | 3.86 | 0.24 | HHpred | | -------------YGGM-QSVLGKGGGFPVGAVGGSDGGTFNANPVTMVAGLTAMRKLTPAEFDRLATLGQQLRAGVEEVGVVGYGSHIHLHQRPLA---DYRNSERAFVGRALMG-RGIFITPALFGCLSTPMGVPEV-----EAFVDAFAAALQDA--- |
4 | 1uutA | 0.14 | 0.12 | 4.25 | 0.61 | MUSTER | | TLVEQPQLTVADRIRRVFLYEWNKFSKQESKFFVQFEKGSE-YFHLHTLV--ETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVK--GGANKVVDSYIPAY--VQPELQWAWTNLDEYKLAAL------NLEERKRLVAQFLAESSQ---- |
5 | 4z4jA | 0.07 | 0.06 | 2.34 | 0.69 | CNFpred | | SEKCKEMAFHAFEFLKNKFWD------EGLFWSVSH-VDVTKHVYVQAFGIYGLSEYYDEEALHMAKRLFEILETKCKRE-----NGYTEQFERNWQEKENRFLSIASKTMNTHLHVLESYT---------------NLYRLLKLDDVYEALEWIVRLFVD |
6 | 1vt4I3 | 0.13 | 0.11 | 3.87 | 0.72 | HHsearch-2 | | YALHRSIVDH--YNIPKTFDSDDLIPPYLDQYFYSIGHHLKNIEHPER---MTLFRMVFLDFRFLEQ--------KIRHDSTANTLQQLKFYKPYICDN-DP---KYERLVNAILDFEENLICSK-------YTDLLRIALMAEDEAIFEEAHKQVQRGGG |
7 | 1uutA | 0.10 | 0.09 | 3.25 | 0.68 | Neff-PPAS | | TLVEQPQLTVADRIRRVFLYEWNKFSKQESKFFVQFEKGSE---YFHLHTLVETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVKNKVVDSGYIPAYLLPKVQPELQWAWTNLDEYK--------LAALNLEERKRLVAQFLAESSQ---- |
8 | 2jp6A | 0.16 | 0.04 | 1.24 | 0.43 | HHsearch | | GSTG-P-QTTC---QAAMCEAGCKGLGKSMESCQG----DTCKCKA------------------------------------------------------------------------------------------------------------------- |
9 | 1uutA | 0.14 | 0.12 | 4.26 | 0.51 | SP3 | | TLVEQPQLTVADRIRRVFLYEWNKFSKQESKFFVQFEKGSE-YFHLHTLV--ETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVK--KGGANKVVDYIPAYPKVQPELQWAWTNLDEYKLAAL------NLEERKRLVAQFLAESSQ---- |
10 | 1qr2A | 0.09 | 0.09 | 3.35 | 0.51 | PROSPECTOR2 | | KSFNGSLKNVAVDELSRQLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREWMDRVLCQGFAFDIPGLLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRHWHFGQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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