Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | FLRYILMPLIAVIMMFILGIIRRNKPAIKIKVIIIYVLLCSLCLALPGFFGFAGNLFNPYWYLIAQVIYLILGIIHVNLLHRYFRKHIDSVGMSILFESILSLTCIAFGGYLFTLIFNWLSNGTGYAVMAATSILIFVVPMVFYYCYVQFISIPFDIYKTWRYSPDQKLPDFDGVDFDRLMVLNVELSKNLEDANRFRIKAKTLPTGVTFGDWFYRVVDDYNHKNPNSVIHLSDIEKEPYYWIFYTKKSFFSFRKYIDFDQDISTNNISENEVVICKRV |
1 | 5tsiA | 0.11 | 0.11 | 3.86 | 1.01 | SPARKS-K | | LLMFDFVQLTVVVVGCILVVSIVRPYIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIMSLKGLWTIRAFEALFHKTLNTHTATWFLYLSTLRWFLFRADILFVFFFTLAAWIEIGIIICLAMLILGTFQWCVATSIAVDGMMRDRVFKFIDLPSESSWPHRGQIEVRNLTVLSF------SAEGRQRVGILG-RTGSGKSSLFNALLK-LVYTDGEISIDGVNWNKMPWRKAFGVVPQ-----KVFIFTGPLRMNLDPYGCHSDEELW |
2 | 5t0oA | 0.10 | 0.10 | 3.57 | 1.01 | CNFpred | | VVKTFVEALILVIIVMYMFLKN---------FRATLIPMIAVPVSLLGTFAGLYNLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPFKFV-SVFSAGVA-PNSLVPE-EDQGLMISIINLPS-ASALISEVDHISQEVLKTGVKDAMAMIGFLKENAAAMFIGLQDWKDRNVSADIAELNKKFAFDRNASSVFIGL |
3 | 5wb1A | 0.08 | 0.08 | 3.20 | 1.04 | PROSPECTOR2 | | QSKPVTLFLYGVVFLFWMQYLLDHNSLASVPCTLLTACFYVAMFASLCFITEYDYLEVSYPIILNVELMLGAFISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHQELHCLLAEFRLVPRGPRGSQVQGGGLVRPGGSLRLSCAASGSIFTIYAMGWYRQAPGKQRELVARITFGGDTNYADSVKGRFTISRDNAKNAVYLQMNSLKIVEEADYWGQGTQVTVSSRLE--------V |
4 | 3wdoA | 0.06 | 0.05 | 2.01 | 0.93 | SPARKS-K | | LMSTFVALPGQLADVYLATMLIAFGSVVPFIIYAEVVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPA--GYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDG------QGVFLAGAMLAAVWLAVASTMKEPYVSSLRIEIPADIAANEALKLLETEGV-KEVLIAEEEH---SAYVKIDSKVTNRFEVEQAIRQAL---------------------------------------------------------- |
5 | 2pmvA | 0.11 | 0.10 | 3.64 | 0.95 | FFAS-3D | | --EPLVNGIQVLMESILIAMNLAGAYNLKAQKLLTYQLLGLTIMALTSKVSILSPNAEASAFYGPSLAILALCQATLPIAVRFAKTLLANSSFNVDTGAMATLALTCMYGQVLKDIVEKISMKIKYSTGLAMQALSVTTDMILNEIAQILPSLKGKTYLDVPQVTCSPDTSASNIT----VIYTINNQLRGVELLFNETINVSVKSGSVL----LVVLEEAQRKNPMFKFETTMTSWGLVYWQFLSGVT--------PLNEGVADYIPFNHEHITAN-- |
6 | 5tj5A | 0.14 | 0.10 | 3.45 | 0.46 | HHpred | | -PTIVTFPFMFAIMLAALSLVLNEKKINKMKDMAFYIILLMGVFSMYTGFLYNGTENLLFSNSYKMKLSILMGFIHMTYSYFLANHLDIGNF---IPGLLF--MQGIFGYLSVCIVYKWAVDWVPYKVVFLLLMALVCIPWLLLVTIEFCLNVTASYLRLWALSLAHA--QLSSVLWTMTIQIAFG------FRGFVG----VFMTVALFAMWFLHWVESMSKPY------------------------------------------------------ |
7 | 6gs1A2 | 0.10 | 0.08 | 2.77 | 0.79 | MUSTER | | VARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTL--PMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVVSWLVASYGLQSIGELMILGLAMVAQLPQRLM-GMMAVPDNVTDPLMSLEVYGRV-----------------FLQIGVA--AVIAVLMLLTAPKLHRMTQD---------------------------------------------------- |
8 | 5xanA | 0.11 | 0.09 | 3.38 | 1.01 | CNFpred | | AIRSGAIAALVGIGLVFVMLFA------YYGLWFGLVGALGLLFSSIIILGILGATLTLPGIAGLVLTIGAAVDGNVISFERIKEELIKNAIGAGYEHSTAAILDVNASHLLSALALYNYSTVKGFAVTLIIGVIASTFSNLVFWFMQWLAQRRPMSAPQWIKHTHFDFMKPAKVITTLSVLLA-GLNYGVDFAPGTTLTARVDR-QVTTEQLRNSVIGAGVSKVTGQSATIQRDTQQGQNFTVKVPE------------------------------- |
9 | 2bpsA | 0.09 | 0.03 | 0.97 | 0.47 | HHsearch-2 | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGSYIDITIDLKHYN--GSVFDLRLS-DYHPVKKVIDIAWQAQSVSMPPR-------EG---HWIRV----VNK-DKVFSGECKLSDCGITNGDRLEIL-- |
10 | 5do7B2 | 0.06 | 0.05 | 2.06 | 0.93 | Neff-PPAS | | LIHGAEACLMSMTIGFLYFGHGSIQLSFMDTAALLFMIGALIPFNVILDVISKCYSYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPFLLHFLLVWLVVFCCRIMALAAAALL-----PTFHMASFFSNALYNSFYLAGGFMINLSSLWTVPAWISKFSRRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLI-VIGLSGGFMVLYYVSLRFIKQKPSQDW-------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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