Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MATPIRPLSYSLRRQSNGESRRLSTRVTSVTVCSVRYSVLSFLNTTTVRWKRFVPVV |
1 | 4mhcA5 | 0.08 | 0.07 | 2.82 | 0.87 | SPARKS-K | | -EIEHTILKVKLVKPSPNTF---VSSVENLLIVATFDIYILTISFNDRTHELNIFNT |
2 | 1bf2A1 | 0.19 | 0.18 | 5.68 | 0.29 | FFAS-3D | | -AINSMSLGASYDAQQANTFRVYSSQATRIVLYLYSAATYTLSPAGSGVWAVTVP-- |
3 | 1bf2A1 | 0.15 | 0.14 | 4.70 | 0.23 | HHpred | | --INSMSLGASYDA-QQATFRVYSSQATRIVLYLYSAGTYTLSPAGSGVWAVTVP-- |
4 | 6nb6A3 | 0.19 | 0.19 | 6.21 | 0.67 | MUSTER | | RYLRHGKLRPFERDISNVPFSPDGKPCTPPALCYWPLNDYGFYTTTGIGYQPYRVVV |
5 | 5l56A | 0.16 | 0.09 | 2.91 | 0.65 | CNFpred | | --------------------------LTAVAAYDYQGRTVVFAGTRSGRIRKILVDL |
6 | 1bf2A1 | 0.16 | 0.16 | 5.25 | 0.33 | HHsearch-2 | | -AINSMSLGASYDAQQAITFRVYSSQATRIVLYLYSAGTYTLSPAGSGVWAVTVAGI |
7 | 5lqwX9 | 0.22 | 0.16 | 4.98 | 0.86 | Neff-PPAS | | -----------LRRVSPISYMEIDPNGRCIILSSVEQNKLCFLVDYAQK-----LRI |
8 | 1mgxA | 0.29 | 0.18 | 5.33 | 0.38 | HHsearch | | --------------YNSGKFVQGNLR------C-MKCSFARVFNTRTTFWKQYVD-- |
9 | 1sgvB2 | 0.17 | 0.16 | 5.21 | 0.74 | SP3 | | ---ARRDLTAAEASAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLR |
10 | 4yptA1 | 0.05 | 0.05 | 2.40 | 0.36 | PROSPECTOR2 | | IQLD-DDARVFVQANMDCLPTDWRLVNKFDSVDGVRTIKYFECPGGIFVSSQGKKFA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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