Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MTFPKENINNYASSSFNYKYLIEEFLQWSSSCNRISYPTKYFDFLLVIIMTFVFLCLVYLLIWIEVLLNSSRPDPKHR |
1 | 1gakA | 0.13 | 0.13 | 4.46 | 0.81 | SPARKS-K | | FDDVVVSRQEQSYVQRMVNFLDEEMHKLVKRFRDMRWNLGVFLLKKVNRERMMRYCMDYARYSKKILQLKHLPVNKKT |
2 | 5c6gA6 | 0.14 | 0.13 | 4.35 | 0.50 | FFAS-3D | | --------SKSSNFSTKFLPKVLKTSQELKETLQKRTSLVHVQSIRNIYDKVVDLCRFY-QTWESLILSERVEGGIPR |
3 | 1l3aC | 0.24 | 0.15 | 4.81 | 0.23 | HHpred | | ------------------------FFNLSNLDENIYIPVTKAEFA--VLVSAFNFVMPYLLGWHTAV-NSFKPESGAE |
4 | 6ftg5 | 0.14 | 0.14 | 4.81 | 0.75 | MUSTER | | MQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLIIASVQPTTWSS |
5 | 4akkA | 0.10 | 0.08 | 2.88 | 0.57 | CNFpred | | ---------------GQFSRIIRHLLNIVPQLNSIDDPQIAGRMVALYSFMQGKELAGQERALGALGFARGQFSDELR |
6 | 1vt4I3 | 0.21 | 0.18 | 5.69 | 0.48 | HHsearch-2 | | ---------EYALRSIVDHYNIPKTFD---SDDLIPYLDQYFYSHIPYIPKYERLVNAILDFLPKIEENLICSKYTDL |
7 | 4e6hA5 | 0.09 | 0.09 | 3.42 | 0.72 | Neff-PPAS | | NQATESNLPKPNEYDVQQLLIWLEWIRWESDNKLELSDDLHKARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDST |
8 | 4g1eB2 | 0.14 | 0.10 | 3.50 | 0.46 | HHsearch | | CTYKNE-DD--CVVRFQYYEDSSLYVVEEPECPK------GPAQCKK-KLQA-LKKKNAQLKWKLQAL---------- |
9 | 4b89A1 | 0.14 | 0.14 | 4.81 | 0.70 | SP3 | | QEGAPKDVANLNNKVDELKKSLPNYFSWFSTTQRAKYHDLYSKVIVAMSGLLHQFMVNVTLRQLFVLLSTKDEQAIDK |
10 | 2dbhA | 0.12 | 0.12 | 4.12 | 0.42 | PROSPECTOR2 | | GSSGSSGSSALSRNGEKKDTVLRQVRLDPCDLQEIPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGPSSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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