Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKSQFKANVLAILLVSLFLINGLVFLSKTLFKLFNFRVTHSLNNYYTFNLLIKAWRSIKNDFSSLNNFVFFIERQVHNFIGLLIEQPSIEEDNQPEVIEETPKLEIVVVIEKEVINSKLSDYFCFFKYRSLFFEL |
1 | 5yfpE5 | 0.13 | 0.11 | 3.86 | 0.74 | SPARKS-K | | QDTLPAIEIVNILNLQTFLTLIGEELYGLLLSHYS-HFQVNSIGGVVVTKDII------GYQTAIEDWGVKFA-TLRELANLFTVQPE--------LLESLTKEHLADIGRDIIQSSNREDFNHDNFINSVK--- |
2 | 5o0tA | 0.22 | 0.13 | 4.21 | 0.60 | FFAS-3D | | IKYYIENNWVKIAFLALYVFVNMFFFMSAVEKYESARGCGATLNLNGALILIPMLRHFSIEFHKLVGQVMFALAIVHTGAHFL---------------------------------------------------- |
3 | 6bq1A | 0.13 | 0.10 | 3.35 | 0.29 | HHpred | | ---EEELERHAQFLLVNFNHKRIRRVADKYLSGLVDKFPHLLWSGTVLKTMLDILQTLSLS---L-------SADIHKDQ--------------PYYDIPDAPYRITVPDTYEARESIVKDFAARCGM------- |
4 | 4ltoA | 0.13 | 0.13 | 4.36 | 0.67 | MUSTER | | -PGIAWIALLLLVIFYVFAVMGTKLFAQSLGASMYTLFQVMTLESWSMGIARPVIEAYPWAWIYFVSFILVSFTVLNLFIGIIIESQSAHWEAEDAKRIEQEQRAHDERLEMLQLIRDLSSKVDRLERRS----- |
5 | 3gi8C | 0.09 | 0.06 | 2.23 | 0.56 | CNFpred | | KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGNIITGALS-------------------------------------------------- |
6 | 1vt4I3 | 0.15 | 0.14 | 4.73 | 0.83 | HHsearch-2 | | HRSIVDHYNIPKTFDSPYLDQYFYSHIGHHLKNIEERMTLFRMV---FLDFRFLEQKIRHDSTAWNASGS-ILNTLQQLK---FYKPYICD--NDPKYERL-VNAILDFLPKIEENLICSKYTDLLRIALEDEAI |
7 | 4uosA | 0.16 | 0.16 | 5.20 | 0.62 | Neff-PPAS | | ILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGV |
8 | 1vt4I3 | 0.15 | 0.13 | 4.47 | 1.09 | HHsearch | | -EYALHR---SI--VDHYNIPKTQYFYSHIGHHLKERMTLFRMV---FLDFRFLEQKIRHDSTAWNASGS-ILNTLQQLK-FY--KPYIC--DNDPKYERL-VNAILDFLPKIEENLICSKYTDLLRIALMDEA- |
9 | 4tqlA1 | 0.13 | 0.13 | 4.37 | 0.55 | SP3 | | MEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQQEAKQKMEKLLKQLKEEMKKMKEK---MEKLLKEMKQRMEEVKKKMDDEIKKNIDDLKKIAEDLIKKEENIKEAKKIAEQLVKRAKQLIE- |
10 | 5fmmA2 | 0.11 | 0.10 | 3.76 | 0.56 | PROSPECTOR2 | | SSMMWEINGPESVLVNTYWETVKIQWSQDPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLTFDTVQIIKLLPFAAAPPKQSRMQFSSLTVNVRGSGMRILVRGN------SPVFNYNKATKRLTAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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