>PF17458 (283 residues) MELNKTSESLFSAKIDHNHPRTEAHEPRDQREVRVFSLEGRSSTRQEKADRMPGRTSSRQ ESSKGSEEGAVHESTAGVSSKEEEESKGDGFFTGGNPTSGMALVETPMAVVSEAMVETST MTVSQVDLQWVEQLVTSTVESLLVADIDGKQLVEIVLDNSNTVPAAFCGANLTLVQTGEE ISVSFSNFVDQAQLTEATQLVQQNPKQLVSLVESLKARQLNLTELVVGNVAVSLPTIEKI ETPLHMIAATIRHHDQEGDQEGEGRQDQHQGQHQEKKVEEAHI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MELNKTSESLFSAKIDHNHPRTEAHEPRDQREVRVFSLEGRSSTRQEKADRMPGRTSSRQESSKGSEEGAVHESTAGVSSKEEEESKGDGFFTGGNPTSGMALVETPMAVVSEAMVETSTMTVSQVDLQWVEQLVTSTVESLLVADIDGKQLVEIVLDNSNTVPAAFCGANLTLVQTGEEISVSFSNFVDQAQLTEATQLVQQNPKQLVSLVESLKARQLNLTELVVGNVAVSLPTIEKIETPLHMIAATIRHHDQEGDQEGEGRQDQHQGQHQEKKVEEAHI | |||||||||||||||||||
1 | 5j67A | 0.11 | 0.10 | 3.58 | 0.58 | SPARKS-K | IRCEEKGRCPSTCHLCRRPKEQLSPTPEINRVVPLYTLIQDNGTKEAFKSACSGKGDVIDDWCRCDLSAFDANGLPNCSPLLQPVL---RLSPTVEPSSTVVSLEWVDVQPIGTKVSDYILQHKKVDLSFADDLLSGLGTSCVAAGRPEVSIYSVIFKCLE--PDGLYKFTLYAVDTRGTVTLRTACPLDDNKAEEIADKIYNLGKEQQMAYNTLMEVSA---------------------SMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLER | |||||||||||||
2 | 3nuiA1 | 0.14 | 0.06 | 1.94 | 0.49 | FFAS-3D | -------------------------------------------------------------------------------------------------VNGRRYLDANSGLWNMVAGFDGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFLEAVKDKASKTPFDGNLLGLICRPLGQSVVLCPPFILTEAQMDEMFDKL---EKALDKVFAEVAA------------------------------------------------------------------ | |||||||||||||
3 | 2rrlA | 0.13 | 0.07 | 2.34 | 0.33 | HHpred | -------------------------------------------------------------------------AAAATSAKVEVD----SPPAPVTH-GAAMPTLSSATAQPLPVASAPVLSAPLGSHEWQQTFSQQV-M-LFTR--QGQQSAQLRLH-----PEELGQVHISLKLDDNQAQLQMV--SPHSHVRAALE------AALPMLRTQLAESGIQLGQSSISSE------------------------------SFAGQQQSSSQQQSS-------- | |||||||||||||
4 | 5cwqA | 0.13 | 0.11 | 3.78 | 0.59 | MUSTER | EELERESEEAERRLQEARKRSEEARERGDLKELAEALIE--EARAVQELARVACERGNSEEAERASE---KAQRVLEEARKVSEEAREQG--DDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDD--EVLALALIAIALAVLALAEVACCRG-----------NKEEAERAYEDARRVEEEARKVKESAEEQ---------GD--------SEVKRLAEEAEQLAREARRHVQECRGGWLEHHH------------- | |||||||||||||
5 | 4aimA | 0.14 | 0.05 | 1.82 | 0.64 | CNFpred | -----------------------------------------------------------------------------------------------------QVVVTVLQHDLENDPDILGMVAASAALCLSGAPFMGPIGAARVGWVDGAYVLNPTL-------DEMKESKMDLVVAGAVMMVESEIELSEEIVLGGVNFAHQQMQAVIDAIIDLAEH----------------------------------------------------------------- | |||||||||||||
6 | 2rrlA | 0.13 | 0.08 | 2.70 | 0.56 | HHsearch-2 | --------------------------------------------------HMASD--DRATGPAL---TPLVVAAAATSAKVE----VDSPPAPVTHGA-AMPTLSSATAQPLPVASAPVLSAPLGSHEWQQTFSQ-QVMLFT---RQGQQSAQLRLH-----PEELGQVHISLKLDDNQAQLQMV--SPHSHVRAAL---EA---ALPMLRTQLAESGIQLGQSSISSE-------------------------SFAGQQQSSSQ-QQSSR----------- | |||||||||||||
7 | 2tmaA | 0.11 | 0.11 | 3.79 | 0.86 | Neff-PPAS | -MLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQK-DEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLER--------AEERAELSEGKCAELEETNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAET--------RAEFAERSVTKLEKSIDDLEDELYAQKLKYKASEELDHALNDMTSI-- | |||||||||||||
8 | 2rrlA | 0.12 | 0.07 | 2.50 | 0.62 | HHsearch | --------------------------------------------------HMASD--DRATGPAL---TPLVVAAAATSKVEVDS--P---PAPVTHGA-AMPTLSSATAQPLPVASAPVLSAPLGSHEWQQTFSQQ-VMLFT---RQGQQSAQLRLH-----PEELGQVHISLKLDDNQAQLQMV--SPHSHVRAALE------AALPMLRTQLAESGIQLGQSSISSE-------------------------SFAGQQQSSSQ-QQSSR----------- | |||||||||||||
9 | 5cwmA | 0.11 | 0.08 | 3.07 | 0.51 | SP3 | ----------------------------------------DPEDELKRVEKLVKEAEELRQAKEKGSEEDLEK---ALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLA----KRVLELAEKQGD--PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQ---------GDPEV----ARRAVELVKRVAELLERIAREGSEEAKERAERVREEARELQERVKEL | |||||||||||||
10 | 3tnfB | 0.08 | 0.07 | 2.82 | 0.91 | PROSPECTOR2 | LNIKKGEEKTYEENLEGFEKLLTDSEELSLSEINEKMEAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMSFFNEKGEEVTHYVIGKDLGGKFYPIHKEQKILEKDGKFYLLKQGED--------WESIKDSPEKQKKAEHDFHKLQYE-----------------TPMTVKKLVHHNKGLETTIHKERVEETKQQLEDNGKEKIENNISK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |