Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VAPPAVPVGKIKSFGPFGPKYEVGHALRQLDDGDWMIEVTMVESGEKAEYRWTHLLDDPEAH |
1 | 1mhnA | 0.15 | 0.15 | 4.87 | 1.03 | SPARKS-K | | LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRE--TCVVVYTGYGNREEQNLSDLLSPICE- |
2 | 4a4fA | 0.19 | 0.18 | 5.73 | 0.42 | FFAS-3D | | -TQPSWKVGDMAVWSEDGQCYEA--EIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEG- |
3 | 3npeA1 | 0.23 | 0.19 | 6.08 | 0.24 | HHpred | | -RIPPFIDGVYARNGA-NPCFDP-VAGHHLFDGDGMVHALRIRNGAAESYACRFTE------ |
4 | 1xuvA | 0.15 | 0.15 | 4.90 | 0.66 | MUSTER | | WIGPRGFTTALKIFEPKGGSWQYIQKDPEGNEYAFHGVNHDVTEPERIISTF-EFEGLPEKG |
5 | 3be3A | 0.10 | 0.08 | 3.00 | 0.72 | CNFpred | | --------GVYRHYK--GDHYLALGLARADETDEVVVVYTRLY-LPMSTRLLRIWNETVDTG |
6 | 3be3B | 0.09 | 0.08 | 3.11 | 0.29 | HHsearch-2 | | --AQDFRPGVYRHYK--GDHYLALGLARADETDEVVVVYTRLYRAGLPSRLLRIWNETVDTG |
7 | 4a4fA | 0.08 | 0.08 | 3.13 | 0.93 | Neff-PPAS | | -THSWKVGDKCMAVWSEDGQCYEAEIEEIDEENG-TAAITFAGYGNAEVTPLLNLKPVEEG- |
8 | 3be3B | 0.09 | 0.08 | 3.10 | 0.45 | HHsearch | | --AQDFRPGVYRHYK--GDHYLALGLARADETDEVVVVYTRLYRAGLPSRLLRIWNETVDT- |
9 | 5wxkB | 0.12 | 0.11 | 4.02 | 0.74 | SP3 | | KTAQELRAGNVFMVG--NDPMVVQKTEIKGGRSSAKVSMKLKNTGAASETIYDDKFDVVGHH |
10 | 4a4fA | 0.17 | 0.16 | 5.31 | 0.38 | PROSPECTOR2 | | ASTQPTHVGDKAVWSEDGQCYEA--EIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEE-G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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