Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MRNQNLPSGFSPFTWAIAGFCLPVLLWPLALLISPNLLNNPNLSDNQITAMSVFLWGYPFVLGIVARIFYKLHQRRPALARKGLALSAVIFYGVLYYVATVGFN |
1 | 6ei3A | 0.11 | 0.11 | 3.86 | 0.81 | SPARKS-K | | PLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHAWQILPYALLTFGEVLVSATGIEFAYSQPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRN |
2 | 5ezmA3 | 0.18 | 0.15 | 5.01 | 0.83 | FFAS-3D | | ----------SPRSWGKQLIGM-AIVAACGLLASPVVATANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMY----LGFTVALLGHE |
3 | 3cirD | 0.22 | 0.19 | 6.09 | 0.27 | HHpred | | MINPNPKRSDEPVFWGWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVRMHHAMHDHV--------PAGKWVFYGLAAILTVV--- |
4 | 5ezmA3 | 0.14 | 0.12 | 4.27 | 1.11 | MUSTER | | ----------SSWGKQLIGMAIVAACGLLASPVVATL-NANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGR |
5 | 3rkoC | 0.12 | 0.10 | 3.38 | 0.75 | CNFpred | | -----------AGSVDLAGILLKTAAYGLLRFSLPL-------FPNASAEFAPIAMWLGVIGIFYGAWMAFA----QTDIKRLIAYTSVSHMGFVLIAIYTGSQ |
6 | 3cirD | 0.20 | 0.18 | 5.84 | 0.55 | HHsearch-2 | | MINPNPKRSDEPVFWGWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVRMHHAMHDHV-P-------AGKWVFYGLALIGVVTI-- |
7 | 3m71A2 | 0.14 | 0.12 | 3.95 | 0.86 | Neff-PPAS | | ---HGEVDTLAKILWGYGFLQLFFLLRLFPWIVEKGLN--------------IGLWAFSFGLASMANSATAFYHGLQGVSIFAFVFSNVMIGLLVLMTIYKLTK |
8 | 1zdbA | 0.18 | 0.07 | 2.18 | 0.45 | HHsearch | | ----AVAQSFNMQ----------------QQRRFYEALHDPNLNEEQRNAKIKSI-----------------RDD----------------------------- |
9 | 6a2jA3 | 0.10 | 0.10 | 3.57 | 0.96 | SP3 | | --PLQIGKKMQFHMIGILIYSYIVVLLLFVWIIVAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSEL-ALGFALAHSFFIACLFGVLCYFLLLIARF |
10 | 5ezmA3 | 0.12 | 0.11 | 3.77 | 0.58 | PROSPECTOR2 | | SPR--------SWGKQLIGMAIVAACG-LLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLTVGRPAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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