Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LKPFFLVTDIGFIIYWLITFFHLIPEEVAFKDYDNPIIIAWNWSFFPLDIFISITGLYSIYLYNKNNPAWRNWALISLVLTFCSGLQAIAFWAFSKDFDITWWAANLYLMIYPLFFIKDFIAEKN |
1 | 4ikvA | 0.08 | 0.08 | 3.16 | 1.07 | SPARKS-K | | RVIAYIPLFVASAMFWAIQEQGSTIANYADKRTQLDVLSPAWFQSLNPLFIIILAPVFAWMWVKLGQPTIPQKFALGLLFAGLSFIVILVPGHLSGLVHPIWLVLSYFIVVLGELCLSPVGLSAT |
2 | 5v7pA1 | 0.15 | 0.14 | 4.55 | 1.07 | MUSTER | | LSPAGKISLQSFTGSSLVFFVIC--MFNHYYGITN--------LVVNTLIVFFYAVNVYFFLKFFYNEFAFAIAIRAAFLGLVLVLGLYIKLVA----PPNIQIFGGYMSVMALFHYSEFLA-PK |
3 | 5k7vA2 | 0.11 | 0.10 | 3.75 | 1.04 | SPARKS-K | | -------TTEEFMARAISAIAELAAIEAIYRLADNHTTDKFMAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYRLADNYIEKAIEAIEKIARKAIKAIEMLAKNIT |
4 | 6nf4A | 0.14 | 0.12 | 4.11 | 0.59 | FFAS-3D | | ---LLLASSLGSWLMSWCSVVAS--VAEAGQKSPSFSWTSLTYSLLLV-LEKCIQNLFIVESLYRPGRKRQILKNICMFLFMCN----ISLWILPAFFGTSVWTT-VLNVAIPLNLFYRM----- |
5 | 6mjpG3 | 0.11 | 0.09 | 3.18 | 0.31 | HHpred | | ---------------------DYVHYLKASEQDSSRYELALWRVTQPISIVMMLMALSFIFGPLRVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLALAPSLVFLAIALGLLGRKL---- |
6 | 6mjpG3 | 0.12 | 0.11 | 3.96 | 1.07 | MUSTER | | LAPDKLAVKPEEL---LTGLSDYVHYLKASEQDSSRYELALWR-TQPISIAVMMLMALSFIFLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPFGALAPSLVFLAIALGLLGRKL---- |
7 | 3rkoC | 0.13 | 0.12 | 4.14 | 0.89 | CNFpred | | AGSVDLAGILLKTAAYGLLRFSL------------PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI |
8 | 5x5yG4 | 0.11 | 0.06 | 2.30 | 0.61 | HHsearch-2 | | ----------------------------------------------PLVTA--ALVLMAISFIRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLVVIPASICALAGVWLLRRA----- |
9 | 3vvnA2 | 0.10 | 0.10 | 3.59 | 0.94 | Neff-PPAS | | LYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRIS |
10 | 6mjpG3 | 0.10 | 0.09 | 3.26 | 0.47 | HHsearch | | KPEELSLT----------GLSDYVHYLKASEQDSSRYELALWRVTQPISAVMMLMALSFIFGPLRVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLALAPSLVFLAIALGLLGRKL---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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