Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MDNKKEDGSSKSDSSKNGENSKNNKLMSSFSSVTSSTGEALQNCTESEWDASDEPYSAELLNVKKKPNRVNVFSATEKNMETVIVTEVSPPQTPLQPKPVIEHHNLARLIQKSCQLLLEKTTAEGTEVHLKMEFPDWRD |
1 | 4pf1A1 | 0.10 | 0.09 | 3.47 | 0.75 | SPARKS-K | | ---FSEDSDSDIPEKFTPKTDLFDYTRREEMIPM-RDGVKLQNTPERRTLRFNSSSLSMVVPTSAARYIIVYQDVRGKYG----SEGGYMMNKPLTGPLNTTGTDHSTDTYDTIDWLVKNIPESNGRVAAIGGSYEGYT |
2 | 6neqz | 0.12 | 0.11 | 3.84 | 0.46 | FFAS-3D | | --EDTQNEGKKTKKNKTAFSNVGRKISQRVIHLFDEKGNDLGNMHRANVIRLMDERDLRLVQRNTSTEPYQLMTGLQILQERQRLREMEKANPKTGPTLRKELHDLDTKTKQIQQWI-----KKKHLVQITIKKGK--- |
3 | 3k7dA2 | 0.11 | 0.08 | 2.83 | 0.31 | HHpred | | -----------------------------GTLPVMKVSDHLTWLAEAMIDYGKPNHLGWELGYSSDLDLIFLHDCPMDA------------M-TDGEREIDGRQFYLRLAQRIMHLFST-RTSSGILYEVDARLPSGAA |
4 | 6h9cb | 0.14 | 0.12 | 4.20 | 0.80 | MUSTER | | LESKEGTTTVDKDLDVTKNVTRTDEPNEDNTPDYFSTGDRVLVPDTEEWERLGFGIVAKTVNVRTTDDVLLAFANPNTNGPTFKIRSNESPFTIGGDAGID-----------TAFMWLKKAESAQNDPAVEIIAYR--- |
5 | 4etpA | 0.12 | 0.06 | 2.05 | 0.48 | CNFpred | | --------------------------------------------------------VGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLN-------------GDGIIPSTISHIFNWINKLKT-KGWDYKVNAEFIEIYN |
6 | 4xxfA | 0.14 | 0.12 | 4.18 | 0.39 | HHsearch-2 | | FANEFDHTVAGHLTVRDPE---NKHHFW-----VNPFGLAFRLMTVSTVIGGGKRRLAGFMIHKARPEVQAICSHTYGKAFS-SLGK---PLAITTQDSYGDVALLGDESGTIAVALQQKKANHGLLT-----VTTIDS |
7 | 6qt9Y | 0.18 | 0.16 | 5.15 | 0.91 | Neff-PPAS | | --ETKEFGDTTVERSVTQNIDRTRTDSPNNENQPSTGPEAIAVENTEEWERLDFGIVAETVNIRTTDDIDIAFADPNKNGPVIRVREGESPFTIGGDAGIESAFIWLRQA---------ETASNTPGIQIIAF------ |
8 | 2k3fA1 | 0.17 | 0.07 | 2.37 | 0.31 | HHsearch | | -------------------------------------------------------------MAKKVAAQIKLQLP----------AGKATPAPPV-------GPALGQHIMEFCKRFNAETAKAGMILPVVITVEDKS- |
9 | 2mk4A | 0.12 | 0.11 | 3.83 | 0.59 | SP3 | | QESVTMDGKQYSTIEVNGQTYLIPDNGSKKRVARSLDSKVPQQTL----RRGDVLMQGAASPELTVSGTLLVEADDASAKATRHGLNFKQSSGGIALLEAKPGTDLNAIATKLKSE--------GVNVQIELSGAEQQP |
10 | 5tx1R | 0.10 | 0.10 | 3.68 | 0.56 | PROSPECTOR2 | | MNGTGGAFEGGLFSPYLTTRLPGWAGVRQNVMGSTVDGRPVLPAN-----SSTMTYATVGNSSLDSTAAAAAAAAAMTATRLASSYMPSSGSSPSVPSSIIAEEKLLALLAELEALSRQLAALTQQVSELREQQQQQNK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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