Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MLTHFQYKPLFENKELPGWRFSFYFRKERYAGVYHPDGKIEWVTAAPPEKAEDQVTGQIHELMLFHVYD |
1 | 4py5A1 | 0.12 | 0.10 | 3.61 | 1.12 | SPARKS-K | | LLKKLKALGAKEEKPPEHAQYRLRLND--AILTVYKSGSVVYGGKG-REKLKELVAETVLSDT------ |
2 | 2z8uB2 | 0.15 | 0.13 | 4.38 | 1.01 | SP3 | | MVEGTEYEP----EQFPG--LVYRLDDPKVVVLIFGSGKVVITGLK-SEEDAKRALKKILDTIKEV--- |
3 | 4i8oA1 | 0.16 | 0.14 | 4.81 | 1.06 | SPARKS-K | | ENKNYSIQSIGPPGSRAGLRVVFTRPGVTVDIFYNGDGTIQYLTGAN-RSLGQELADHLFETI------ |
4 | 2arhA1 | 0.09 | 0.09 | 3.28 | 0.48 | FFAS-3D | | ---EIRLVRKSQGRFKEEFNFDLSLGSKPLLTLKVFLGRVEVFGVNPNLRNVFEAERKLYEFLSEHF-- |
5 | 1r6vA | 0.10 | 0.07 | 2.65 | 0.26 | HHpred | | FNSTLQVKFSTNLSTLKDPQFVVVDPGVYGRVAYARNQTYDLSLLSGQ--------------------- |
6 | 5boiA | 0.09 | 0.09 | 3.35 | 0.85 | MUSTER | | GNEQIHIVKSGKDADYEVYSLTITDPKTETYMDITQKGYPLWVLEDRDIKKLNDAMNKATKFLKDHRFE |
7 | 4ipbA | 0.08 | 0.07 | 2.83 | 0.69 | CNFpred | | --NGVAWSQDD-----GYYCANFAMNGFTKNVWFNVRGQWVMTLTDL--VSLDRLTPTVYNAFVSGPYA |
8 | 4wsaC1 | 0.15 | 0.14 | 4.88 | 0.38 | HHsearch-2 | | RFGRLELKRISGRGFKNGGTIEFHVRCGECRGILKSKMKLEKLLINSA--KKEDMRDLIILCMVFSQDT |
9 | 5tz8A4 | 0.07 | 0.07 | 2.94 | 0.93 | Neff-PPAS | | -KNKIILTGLDRGYVFEEGMASVVLKDDMIMGMLSQTSENEVEILLSKDIKKRDFKNIVKLNTAHMTYS |
10 | 3r4rA2 | 0.17 | 0.13 | 4.28 | 0.62 | HHsearch | | EIDAFKILSVQS--GVEPKEYPFFIKGNYYKGLK-SSTEIEWVLENVEDKEVTL-D------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|