Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | KTAGSTRSTDRTDALWAEMQATLEEVELSASGGTHVFGPDHDRKLEELRTAQIALAQAWARSEADEAIEMTGQR |
1 | 5cwfA1 | 0.15 | 0.15 | 4.97 | 0.80 | SPARKS-K | | KKAVELAKKNNDDEVAREIERAAKEIVEALRENNS---DEMAKVMLALAKAVLLAAKNIARAAAEIVEALRENN |
2 | 5xy3h | 0.10 | 0.09 | 3.51 | 0.67 | FFAS-3D | | KGKELIKTRQELLDELAGLEKKLFELKGQKAASAAA---TKLTEIKNTRRDVARVKSILMVSQRKALQEKYAKA |
3 | 2vr0B | 0.15 | 0.12 | 4.09 | 0.29 | HHpred | | ------------AGYDDLMIQAREMVRKSAENSVGFHNPAKAQSQQFSQKAIDLAMEATQYLSGDIKTIVPP-- |
4 | 6dmpA | 0.17 | 0.16 | 5.35 | 0.92 | MUSTER | | KEERQRKIIERAQEIHRRQQEILEELERIIRKPGS--SEEAMKRMLKLLEESLRLLKELLELSEESAQLLYEQR |
5 | 4hseA | 0.11 | 0.09 | 3.38 | 0.41 | CNFpred | | --------LKAIEAEIAKLTEEIAKLRAEWER-----EREILRKLREAQHRLDEVRREIELAERQYDLNRAAEL |
6 | 2uvcG | 0.11 | 0.09 | 3.38 | 0.30 | HHsearch-2 | | SEEPIHKLATRGVLFWKELD-------------DKIFSLDRSKRVAELKKRRDYIIKKLNDDFQKVFGRNSAGE |
7 | 5j10A | 0.17 | 0.16 | 5.32 | 0.74 | Neff-PPAS | | -TDELLRLAKEQAELLKEIKKLVEEIARLVKEIQEDPSDELLKTLAELVRKLKELVEDMERSMKEQLYIIK--- |
8 | 4jw1A3 | 0.12 | 0.08 | 2.89 | 0.38 | HHsearch | | ELNSPKPRILSNKKFWKRINSAFESGVFK------GRTDDPAGKIAKIREWHQLLQIS---------------- |
9 | 3lnnA4 | 0.13 | 0.12 | 4.23 | 0.74 | SP3 | | DLAQANSDAAKARAAMTMARRNLDRQRELDKSEI-AAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGG--- |
10 | 4k12B | 0.07 | 0.07 | 2.78 | 0.44 | PROSPECTOR2 | | MDSERD---KARKEVEEYVKKIVGESYAKSTKKRHTITVALVNELNNIKNEESELQILMMESRSKDEAVSKFEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|