Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | QPYTKVITKDAKSDEGLFTVHQVEDKYFYEIPDSLFNREMLMVTRIAKT |
1 | 5z7dA3 | 0.14 | 0.14 | 4.86 | 0.97 | SPARKS-K | | PKISYLFSARGTFVSGEYLVNKKTKFIYYGIGDDTGKMEVVVYGRLTNV |
2 | 6a52A1 | 0.21 | 0.12 | 3.90 | 0.31 | FFAS-3D | | --LADILGLAAPKPFGPFMVVQVDNDVSLDF------------------ |
3 | 4pfeA | 0.10 | 0.08 | 3.00 | 0.24 | HHpred | | ---------YEDSVKGRFTISRDDNTVYLQMNSLKPEDTAVYYCNVNV- |
4 | 6dtmA | 0.16 | 0.16 | 5.41 | 0.69 | MUSTER | | KPIAEIYKSVPKATNEVLTILENGSKATLEYLDPFSHKENFLAVETFKM |
5 | 4hbsA | 0.21 | 0.14 | 4.53 | 0.56 | CNFpred | | ----------------MPWVFKKGDTYYMIGQSMWFGRDVLMFRSKHPY |
6 | 4jbmA2 | 0.27 | 0.27 | 8.16 | 0.33 | HHsearch-2 | | PRISKLKIPCGTIVNGLFKVQKITDRVLYGIHDKTGTMEVLVLGNPSKT |
7 | 1ucuA3 | 0.10 | 0.10 | 3.76 | 0.92 | Neff-PPAS | | KASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGGKDGYYEVSVDKT |
8 | 2mctA | 0.20 | 0.16 | 5.24 | 0.50 | HHsearch | | QKILSEIATNIENNGGTMFYYEENGKYYIECPYKGIYE-------IEN- |
9 | 6c9dA2 | 0.08 | 0.08 | 3.18 | 0.70 | SP3 | | MDPNDMMREKVLDANN-CDYEQKERLLFCVHGDARQDSLVQWEMEVCSL |
10 | 1nnxA | 0.14 | 0.14 | 4.86 | 0.38 | PROSPECTOR2 | | QTVESAKSLRDRISDDLYVFKDASGTINVDIDHKRWNGVEIDVKQIRKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|