Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GDKIGDNVIRFEKGPNNKVFLRLISYDEMAGDSTSSMYKAVANSNIQPIAQAFDIAAFNADTTGVVLDVTSYLNSDNEILNFEANAKRTFRVGSLQADKSYISGVKSFPVNTEIKTVKTYARASGATPGAPPAFGAQPSGSYTVEINSSLMLLPDQPMQPRYYDDRVGYFTRQYVDFEKNPQGVESVRMITRWRLEPK |
1 | 5ft0A | 0.14 | 0.13 | 4.34 | 0.70 | SPARKS-K | | PHKLEDISVHWVFNPDISVFVTCANTHYTFKPQSSPLSRIIADNLKGAVINVVGIHADGVGGNKLILPVIEFPGVHVDDISDKLIKSSSYQGIFKTDNLEEFEFLKNANNVKELILAYTYFANKLAFKDPAEPAVEYQDR---TEVYFSFECHPD-----------VVLFTIKIVRYNQPLNSTAQVFLKNPLLSHIR |
2 | 4j8qA | 0.09 | 0.08 | 2.89 | 0.46 | FFAS-3D | | ----GGDTYSLNADRWGTLWPAATAIPFYKPIDGQ------------RVITYFNPLYDNYEGYDHAVKVEHN----YNVLTKQVEDLTAENESEFGNDPVWVNKDWIGGGYLNVIFRQNLKHLVSLVRDRATAAEGEDDGYIHLELRYK-----------TYDDQANGAVSFNLNSLDLTGKKGIKVKLNTEVVFNLK |
3 | 2cc3A | 0.14 | 0.10 | 3.26 | 0.22 | HHpred | | --------------------------------PHMTQEEAVVNASLWEYVRLRE--SYDADTAQYAYDLVSNFSAPMVNYQQFFNYPNPTSPQILGKHEVEHIASNDVPGVQQIRYKRTLIVDGK------------MPMASTWTATVRYEKVTSLPGRLRLTNP-GGLVVTSYQTSEDT------------------ |
4 | 5oacA2 | 0.11 | 0.09 | 3.12 | 0.77 | MUSTER | | -MTIKYLSSETEKLMNQTVSGIDVCFTLIGVDDDSFASGSKTPKFLDPSNVHIKATLKRGGKDYVLFSENLALL--AKYSTITQGRDQWEEGVKLAAK----------------EMVHLVYIPFSGNTNWPAHINLKDNDVLEVYVNVV------RGAYGAELDA-NACICDVRTSPSIGVEKF-------------- |
5 | 5lhdA | 0.06 | 0.04 | 1.78 | 0.77 | CNFpred | | ----------------NTLKPDSYRVTLRPYLTPNDR-------GLYVFKGSSTVRFTCKATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDID-KTELVEPT----EYLVVHLKGSLVK----------------DSQYEMDSEFEGELA----------DDLAGFYRSEYMEG-------NVRKVVATTQMQAA |
6 | 1d1kA | 0.11 | 0.02 | 0.72 | 0.51 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------TPDCVT--GKVEYTKYNDEDTVGDKELFTNRANLQSL |
7 | 4aq1A2 | 0.08 | 0.07 | 2.63 | 0.86 | Neff-PPAS | | ------SVPASATVATSPVTVKLNSSDNDLTFEELIFGVIDPTQVKDEDINEFIAVSKAAKNDGYLYNKPLVTVKDAS--GEVIPTGANVYGLNHDATNGNIWFDEEQDVHFDVDFSLANVVKTGSGTVSSSPSLSNSGDAVSFTLVIKSIYVKGADKDDNNLLAAPVSVNVTVTKGS-------------------- |
8 | 1d1kA | 0.12 | 0.02 | 0.72 | 0.46 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------TPDC--VTGKVEYTKYNDEDTVGDKELFTNRANLQS- |
9 | 2ckdA | 0.09 | 0.07 | 2.66 | 0.75 | SP3 | | ASGLDSRAYRLDWPTGTTVYEIDQDRREVPIDLRQDWPPALRSAGFDPWLAEGEIGGLSAVGSRIAVETDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVVADRATAQSAPDEMRRVGRWGDGVPMADDKDAFAEFVTAHRL------------------------------------------------- |
10 | 4aq1A2 | 0.06 | 0.05 | 2.21 | 0.71 | PROSPECTOR2 | | SV------PASATVATSPVTVKLNS-----SDNDLTFEELIFGVIDPTQLVKNEFIAVSKAAKNTVKDASGEVIPTGANVYGLNHDATNGNIWFDEEQAGLAKKFSDVHFDVDFSLANVVKTGSGTVSSSPSLSLTNSGDAVSFTLVIKSIYVKGADKDDNNLLAAPVSVNVTVTKGS-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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