Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | EGPNQQDHKPPDERVVKLGKTLRTLSPLLPTILYNTLPPEILAPSVNLHLFPSTHPHLPTVKGRTLYRAALWTVPVAWSSVPLVGNVKLKILSERMVRAGTILDPTHHDQHECGDERLVVRWQTEPRTDSKPFHEAKSEAAPQTDGASSSRFFDSDPGPKAGQSHLSSSSNGTNRGLSVLLGGEEPMFKLSKEGQFTGLFIFSFDEEGRILTHTIEHADEANGWDRTSKFVTLTDWLIGKARES |
1 | 3ff0A | 0.06 | 0.04 | 1.61 | 1.00 | Neff-PPAS | | IPQGFEDAVELRRKNRETVVKYNTKGQDRLRRHEL------FVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCF------PDWEWYNIKVFETDDP---------------NHFWVECDGHGKILFPGYP--------------------------------------------------------EGYYENHFLHSFEL-DDGKIKRNREFN---------VFQQLRALSIPVPQIKRE |
2 | 3dxoB | 0.14 | 0.06 | 2.10 | 1.01 | HHsearch | | ------------------TQHLTIAQTYLAAWNEEDNEGQAWAENTRYVD-----PL--QGEGQQGIAA-IEAARQ---K---FPGYRFVLATP--D---------------GHGNFTRFSWRLISPD--------------------------------------------------------------G-DDVAGGTDVVSLNTEGRIDNVVGFL-DGA----------------------- |
3 | 3ff0A | 0.09 | 0.05 | 2.05 | 1.04 | PROSPECTOR2 | | DNAIPQGFEDAVELRRKNRETVVKYGQDRLRRH------ELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKC------FPDWEWYNIKVFE---------------TDDPNHFWVECDGHGKILFPG--------------------------------------------------------YPEGYYENHFLHSFEL-DDGKIKRNREQQLRALSIPVPQIK----------REGIP |
4 | 3rgaA | 0.11 | 0.07 | 2.50 | 0.86 | SPARKS-K | | GVTDSSWTARPAPDEERRKELAREHCLRINDGLLK-----LYSPRIRFEDPVGS----WTRTGLEALRAHATMAVGS--------NVRETAGLTVAGQ---------------DGRHAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRAL----------------------------------------IGIEYVMVIGVDADGLIDEMRAYDVSLLDP--------------------- |
5 | 3wmdA | 0.16 | 0.09 | 3.01 | 0.73 | FFAS-3D | | -----------NEFARK-----KRALEHSRRINAGDLDADLYAPDAVLEDPVGLPP----VTGHDALRAHYEPL------LAAHLREEAAEPVA-----------------GQDATHALIQISSVMDYLPVGPLYAERGWLKAPDAPGTAR------------------------------------------IHRTAMLVIRMDASGLIRHLKS-------YWGT-SDLTV-----LG----- |
6 | 3ff0A | 0.11 | 0.06 | 2.21 | 0.52 | HHpred | | ---LDNAIPQGFEDAVELRRKNRETVVKY-NTKGQDRLHELFVEDGCGGL-WTTDTGSPVIRGKDKLAEHAVWSLKC------FPDWEWYNIKVFE---------------TDDPNHFWVECDGHGKILF---------------------------------------------------PG--------YPYENHFLHSFEL-DDGKIKRNREF--NVFQ---------------------- |
7 | 3rgaA | 0.12 | 0.10 | 3.62 | 0.72 | MUSTER | | ------HMPAETVRKEVALEYCRRVNAGELEGV-----LQLFAPDARLVDPLGTEP----VVGRAALAARLAPALRGAVHEEPGRPYTSVVLPATVTVGAPGAPPQRRGRTRVGEDGLIREMRVMWGVTDSSWTARPAPDEEREDPVGSWTTMAVGSNVRETAGLTVAGQDGRYLPSGPLLTLPAPADPHRALIGIEYVMVIGVDADGLIDEMRAYDVSLLDP--------------------- |
8 | 2imjA | 0.15 | 0.07 | 2.34 | 0.99 | CNFpred | | ------------------ESAIEKIRLAEDGWNSRDPESLAYTLDTQWRNR------AEFAHNREEAKAFLTRKWAK--------ELDYRLIKELWAFT---------------DNRIAVRYAYEWHDDS-------------------------------------------------------------NWFRSYGNENWEFDEQGLMARRFACINDM------------------------ |
9 | 3dxoB | 0.14 | 0.06 | 2.10 | 0.72 | HHsearch-2 | | ------------------TQHLTIAQTYL-AAWNEDNEGQAWAENTRYVD-----PL--QGEGQQGIAA-IEAARQK------FPGYRFVLATPD-----------------GHGNFTRFSWRLISPD--------------------------------------------------------------G-DDVAGGTDVVSLNTEGRIDNVVGFL-DGA----------------------- |
10 | 3rgaA | 0.11 | 0.09 | 3.40 | 0.93 | Neff-PPAS | | -------------HMPAETVRKEVALEYCRRVNAGELELQLFAPDARLVDPLGTEP----VVGRAALAARLAPALRGAVHEEPGRPYAAHDGTSVVLPATVTVGAPGAPPQRRGEDGLIREMRVMWGVTDSSWTARPAPDEERVGSNVRETAGLTVAGQDGRSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIGVDADGLIDEMRAYGATDVSLLDP------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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