>PF17097 (378 residues) METQAVKTIRDELRELENTVAQASDMVLSEQDHRNASAIREMTQSVIAMSKENSLISVSN EIDYNEEIGNLAIDPSLIDEKIKQSNNFVELLKLTHLEQEALDYFLRYTISSTNTLELES TSDPKFVSLENEVTELENKTLTEHRDKIQEAKKDISDKSKDLANKQDQINELCLGAANSV DECWKMLNELEDIHSQRDNDVKETLSQDTTTTSDLIEETYKEWSSLQTSLTELNNSKDEL DQLIAFKNEKHKDNDSTKIRNANIKNKTITENVKMLKLLINFWESNFIVPGSKKSKLSNL EVYPQTKKFQFKCAEQYTVIIQLNQNGGSIKSIEIFENDGKSVQENKNLSSLILNKYKNP LSSYPIFQVINDIVEELK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | METQAVKTIRDELRELENTVAQASDMVLSEQDHRNASAIREMTQSVIAMSKENSLISVSNEIDYNEEIGNLAIDPSLIDEKIKQSNNFVELLKLTHLEQEALDYFLRYTISSTNTLELESTSDPKFVSLENEVTELENKTLTEHRDKIQEAKKDISDKSKDLANKQDQINELCLGAANSVDECWKMLNELEDIHSQRDNDVKETLSQDTTTTSDLIEETYKEWSSLQTSLTELNNSKDELDQLIAFKNEKHKDNDSTKIRNANIKNKTITENVKMLKLLINFWESNFIVPGSKKSKLSNLEVYPQTKKFQFKCAEQYTVIIQLNQNGGSIKSIEIFENDGKSVQENKNLSSLILNKYKNPLSSYPIFQVINDIVEELK | |||||||||||||||||||
1 | 4l3iA | 0.10 | 0.09 | 3.30 | 1.39 | FFAS-3D | ---ESIVCLQKALNHLLQRTEVVKKHIKESLKERLIKSISVCQKELNTLCSE------LHVEPFQEEGETTILQLEKDLRTQVELKQKKERKQELKLLQEQDQELCEILCPHYDIDSASVPSLEELNQFRQHVTTLRE-TKASRREEFVSIKRQIILLSLENIATLQKLLRQLEQKSQNEAVCEGLRTQIRELWDRLQEEEREAVATISGSKAKVRKALQLEVDRLEELKQNKKVIEAIRVELVQYWDQCQEQRQAFAPFCAEDYTESLLQLHDALFEGVQKWEETW-------RLFLEFERKASDPN--------------------------RFTNRGGNLLKEEKQRAKLQK-------LPKLEEELKARIELWE | |||||||||||||
2 | 5h7cA | 0.12 | 0.11 | 4.03 | 1.08 | MUSTER | LPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQST---DSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTD--------SELVNEIVKQLAEVAKEA--TDKELVIYIVKILAELAKQS-TDSELVNEIVKQLEEVAKEAKELVEHIEKILEELEQQSAFYE-SLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQSSELVNEIVKQLAEVAKEATDLAELAKQSTDSELVNEIVKQLAEVAKEATDKELVKILAELAKQSTDSELVNEIVKQLEEVAKEATD-KELVEHIEKILEELK | |||||||||||||
3 | 4cgkA | 0.11 | 0.10 | 3.47 | 1.30 | Neff-PPAS | -------------------------SNLTAQQQEAQKQVDQIQEQVSAIQAEQSNLQAEND-RLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSYINTIVNSKSITEA--ISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKAT-AEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRAKVRPECTWGVKTLAPWAGDYWGNGAQWATSAAAAGFRTGSTPQVGAIACWNDGGYGHVAVVTAVEST-TRIQVSESNYAGNRTIGNHRGWFNPTTTSEGFVTYIYAD--------- | |||||||||||||
4 | 6ek4A | 0.08 | 0.06 | 2.49 | 1.27 | PROSPECTOR2 | VVYPEVKTLSQAVKNIWRLSHQIIQEKTLRISLYSRDLDEAARASVPQLQTVLRQLPPQDDTELEDPELDDETRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVSNVVILERLESSLKEEQERKAEIQAD-IAQQEKNKAKLVVDRNKIIESQDVIRQDLDKLDLKKELIKQAIKQGVEIAKKI----------LGNISKGLKYIELADARAKLDEINQINKDCDDLKIQLKGVEQRIAGIEDV---------HQIDKERTTLLLQAAKLEQAWNI---------------------------------------------------------------FAKQLQNTIDGKIDQQDLTKIIHKQLDFLS | |||||||||||||
5 | 5j1iA | 0.08 | 0.06 | 2.41 | 0.97 | SPARKS-K | RCISELKDIRLQLEACETRTVHRLARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEVLALSPAAPTLRSELTLLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEKEAQAVPATLPEASLKKLRAQAEAPTFDALRDELRGAQEVGERLQQRHAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGARQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQSVDLRTHYSELTTLTSQYIKFISET---------------------------------------------------------------------------------------- | |||||||||||||
6 | 6ewyA | 0.13 | 0.07 | 2.37 | 1.39 | FFAS-3D | ---DTIAALIADVAKANQRLQDLSDEVEQESVNKAMVDVETARDNAAAAEDD----------------------LEVSQRAVKDANAAIAA------AQHRFDTFAAATYMNGPSVSYLSASSDEIIATVTAAKTLSASS-QAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRK----------------------FDEQREEVQRLAA---ERDAAQARLQAARLVAWSSE------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6ianA | 0.12 | 0.08 | 2.74 | 0.36 | HHpred | ---PKITELTTEIERLNEQEELIVKSVLTQLQQRNKALTDEAAKLKGTLADIN-LAL---EK------STT-QDPSSVKDQATKLNQKRKQVDQLFLNAKE-EALTKKNLENLRILAENQD-FGLYKATRDEAFNVSD-AVLSHQHQIR-LTAKQELL-TKLST------------DPDKKRAAEVLRGILSKRQLKE----ELT--K-QCALSVEEERQLLIKQVKTARGDIEVLERQVNETRDALSESKNRCASL-DEELKSYSGDNIKAFQELQEKD-RELQSF-DSFP-------------------------------------------------------------------------------------- | |||||||||||||
8 | 5j1iA | 0.09 | 0.08 | 3.02 | 1.07 | MUSTER | R-ISELKDIRLQLEACETRTVHRLRLPPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALSPAAPTLR-SELELTLGKLEQVRSLSAIYLEKLKTISLVIRGT----------QGAEEVLRAHEEQLKEAQLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQA--------VLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDS----QAVREQLRQEQALLEEIERH-------GEKVEECQRFAKQ--------------YINAIKDYELQLVTYKAQLEKVQSGSESVIQEYVDLRTH---YSELTTLTSQYIKFIS | |||||||||||||
9 | 3r6nA | 0.13 | 0.11 | 3.77 | 0.97 | CNFpred | VDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLEKSAIYQLEEEYENLLKAS----------------------FERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQK-QEAFSIRMSQLEVKEK-ELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQF----------------FEEAQSTEAYLKGLQDSI-PLQHLLEQIKELEKEREKILEY------------KRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQGDECILKDNERSKWYVTGP-GGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYE------AILALWNQLYINMK | |||||||||||||
10 | 4fzsA | 0.13 | 0.07 | 2.37 | 0.53 | HHsearch-2 | -SDIWFEEKLQEVECEEQRLRKLHAVTLVNHRKELALNTAQFAKSLAMLGSSED--------------------NTALSRALSQLAEVEEKIEQLHQEQELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEWANKPDKLQQAKDEILEWESRVTQYERDFERIS----------TVVRKEVIRFEKEKSKDFKNH------------VIKYL------------------------------------------------ETLLYSQQQLAKYWEA--------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |