Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSNVSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH |
1 | 3h3hB | 0.10 | 0.10 | 3.64 | 1.01 | SPARKS-K | | TQAFAQQFSREWIDAWNAILSHYADGFESSPIVQIAGEPSGRLRGKGAYWREALRIPDLHATLAGVDSVAIHYRGAKGRLALEVFHFGPDRR |
2 | 1b1yA | 0.20 | 0.16 | 5.22 | 0.41 | FFAS-3D | | -----------GQNYVNFKTFVDRMHANLPRDPYVDPAPLPRSGPEISIEMIQAAQPKIQPFPFQEHTD----LPVGPTGGMGGQAEGPT-- |
3 | 2pffA | 0.18 | 0.13 | 4.26 | 0.38 | HHpred | | ---GFISYHNGN----------LKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPEL----FNGYNPEKKEMIQEV------- |
4 | 3k1qF1 | 0.11 | 0.11 | 3.90 | 0.74 | MUSTER | | MPLHMIPQVAHAMVRAAAAGRLTL---YTRTRTETTNFDHAEYVTCGRYTICAFCLTTLAPHANVKTIQDSHACSRQPNEAIRSLVEVSDKA |
5 | 1zo4A | 0.14 | 0.03 | 1.11 | 0.44 | CNFpred | | --------IEVPEDMTRLTLDTIGLCGFN--------------------------------------------------------------- |
6 | 4uisA | 0.14 | 0.12 | 4.09 | 0.44 | HHsearch-2 | | TSLELMHTDPVRNQVEDL--G----A-GVPAVILRSGVPLPPS----S--LQRFLARNISGVVLADHSGAFHNYQSDTAENINSYPEWLAPE |
7 | 5j6qA6 | 0.09 | 0.08 | 2.93 | 0.97 | Neff-PPAS | | ---------KIENYKTAQEIVDAVNAYNATLAEDSDNKLTATIKSTNTVEVKRAKDSNVITLNVGDQHLDFSKVITSEEGTFEGYEKRYS-- |
8 | 3mpxA3 | 0.07 | 0.02 | 0.91 | 0.25 | HHsearch | | ----------------------------------------------------------SRPV--EKVPYALKIETSESCL-LSASSCAERD- |
9 | 4qo5A5 | 0.21 | 0.20 | 6.23 | 0.61 | SP3 | | SKAWAYYNLMHNPIYRALVNAST-----MFTCMGKTFGGERTSQETSCLACHGTVVKVVGTVDTISHGIPVTLVKYEGYPGVGRVPDGSLGH |
10 | 1jvr | 0.08 | 0.08 | 3.05 | 0.47 | PROSPECTOR2 | | HMGQFLQAAYRFQQLRRFLKLALKTPIWLNPIDYSLLASLIPKGYNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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