Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MVVGPISNLRDDALKDDTLNHIRKEYLESKKQISNLLSQETNTNEFSRKPYPNSSPIRKFDHFANERPTTIDAKLREQLRTGASDVAIEQSLRTNSDESRNQMIYDDMKVMKRIIDGQQESIRELRRALEQERYMNSELQRKYNEMERRFDRLEWFINSHDKFQAYQDIRSNTTKKDFSDPIFNNGLKRRWDEYPIRSFEPDTNINRNNRIFSNYDDSTTRLMQITDPHY |
1 | 1ls4A | 0.13 | 0.08 | 2.71 | 0.77 | SPARKS-K | | NAAHELHETLGLPTPDEALNLLTEQANAFKTKIAEVTTSLKQEAE-------------KHQGSVAEQLNAFARNLNNSIHDAATSLNL----------------QDQLNSLQSALTNVGHQWQDIATKTQASAPVQSALQEAAEKTKEAAANLQNSIQSAVQKPAN---------------------------------------------------------------- |
2 | 4wheA | 0.14 | 0.07 | 2.53 | 0.96 | FFAS-3D | | -VNANINALLEDPQKRLMIQEMEDTLVEVRSTSARALAE--------------------------------KKQLTRRIEQASARQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALML--------------------------------------------------------------------------- |
3 | 5mg8A | 0.09 | 0.06 | 2.16 | 0.35 | HHpred | | ----TFRTFMSNYNDYLKLMDLITS----KTKY---TPTIREFERKDFE-PPCDGYVIDPIHQIPIAKRELPPASVNALNNYLAGSSLVFSAYGDREITRSNVEMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKER------------------------------------------------------------------------- |
4 | 6fmlG | 0.11 | 0.11 | 4.05 | 0.79 | MUSTER | | EYRLPRLIWCDGGRLDKLVAGFRSKYLNHPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITVLRDLMNIARVKYRELGLCRLEKAARASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDSGKLAKLDE-RE |
5 | 3o1hA | 0.11 | 0.06 | 2.20 | 0.60 | CNFpred | | -------------IEARQVSELSTRIISSVQMLSNAQNEQERKEAGRVL--------------------EQLESLLTHIKELGGESFD----------------SKLLDALESNVQNVINNLAELGVTVERKLWLAKEIDTRVEEMRLLSEELEQLTRTQVQNTSTIAVANVTHIYDL---------------------------------------------------- |
6 | 3he5A | 0.04 | 0.01 | 0.44 | 0.60 | HHsearch-2 | | --------------------------------------------------------------------------------------------------------SNLVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE------------------------------------------------------------------------------- |
7 | 5nnvA | 0.08 | 0.08 | 3.09 | 1.32 | Neff-PPAS | | ----ELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQN-QEQLEEAIVQFQQKE-TVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTT |
8 | 6f1tX2 | 0.07 | 0.04 | 1.59 | 0.86 | HHsearch | | -----------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLEQEVRLSYRQ-----LQGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGG----GGGGGGGGGGGGGG- |
9 | 2d4uA | 0.06 | 0.04 | 1.90 | 0.64 | SP3 | | GPLGSGGLFFNALKNCKENFTVLQTIRQQQSTLNGSWVALLQT-RNTLNRAGIRYMMDQNNIGSGSTVAELMESASISLKQ--AEKNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQDGFEKQYVAYMEQNDRLHDIAVSDNNA------------------------------------------------------------ |
10 | 2p7nA | 0.07 | 0.07 | 2.74 | 0.80 | PROSPECTOR2 | | PALAAARAKADEQAAREVRASVERQTAYETRLAAQRSAAAFSGGEPPARREAPGAELDEARNASGHASAEQKQALQSGLDDVFADAPPQARSAGAPLYSANAAADSDLWDISDQIGKIKDNLGVYENVVGQYTDFYKAFSDILDALKAALEKLKKDFSLGDNLDNKKAVLFPAQSKDGGIQGEGLPDAPPPGFSCVQKAADGNWVVVVDTPIDTIRD----VGALGSGTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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