>PF17068 (279 residues) MSELLVKGVKHVYGRKMRKTRPTLPNVESPLVTHFHRWAGKRIRLSFLAAELGTREGQHI LPDWNLRGNLFAGLLAAPMRWDRLGNLRVPKSFLMQTKARALEAPSDGKLVKIISVVEER GPGSSSYVPQSKAALQRAKQAMFVPVALQQSDMRYFSSEEIAVDKDTLLAEYSAQLISKV KEGLEVLLSMSGTSHERVELEDWDVVVTYDPDNANDIELRKCKGIPGDPVVIILNMGCLK CTELEELVNLRLRNHEYGLVLKVLKNERLLKFMYRLITF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MSELLVKGVKHVYGRKMRKTRPTLPNVESPLVTHFHRWAGKRIRLSFLAAELGTREGQHILPDWNLRGNLFAGLLAAPMRWDRLGNLRVPKSFLMQTKARALEAPSDGKLVKIISVVEERGPGSSSYVPQSKAALQRAKQAMFVPVALQQSDMRYFSSEEIAVDKDTLLAEYSAQLISKVKEGLEVLLSMSGTSHERVELEDWDVVVTYDPDNANDIELRKCKGIPGDPVVIILNMGCLKCTELEELVNLRLRNHEYGLVLKVLKNERLLKFMYRLITF | |||||||||||||||||||
1 | 1g2rA | 0.15 | 0.05 | 1.69 | 1.24 | HHsearch-2 | --------------------------------------------------------------------------RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQ--------VFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFS-----------MEVEE-SFYD----ELIAYVDHKVKRRELGLE--------------------------------------------------------------------------------------- | |||||||||||||
2 | 1g2rA | 0.17 | 0.06 | 1.89 | 1.49 | HHsearch | --------------------------------------------------------------------------RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQ--------VFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFS-----------MEVEE-SFYDELIAYVDHKVKRR----ELGLE--------------------------------------------------------------------------------------- | |||||||||||||
3 | 4btgA | 0.12 | 0.10 | 3.57 | 0.62 | SPARKS-K | MSATLAAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLRASNKRSMFNYYAAVMHYAVAHNP----------EVVVSEHQGVAAEQGSLYLVIPVGYNAIEGGSIRTPEPLEAIAYNK-----PIQPSEVQAKVLD------------------LANHTTSIHIWPWHEASTEFAYETIRNKRYTAEVKEQRRERVRILKP------TVAHAIMWYSWFVEDDRTLAAARRTSRDDAEKIDGRRMQNAVTLLRKIEMI | |||||||||||||
4 | 1g2rA | 0.14 | 0.05 | 1.59 | 0.66 | FFAS-3D | ----------------------------------------------------------------------------IPLRKSVVSNEVIDKRDLLRIVKNKEGQ--------VFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFSMEVE----------------ESFYDELIAYVDHKVKRRELGLE--------------------------------------------------------------------------------------- | |||||||||||||
5 | 1g2rA | 0.18 | 0.06 | 1.87 | 0.66 | HHpred | --------------------------------------------------------------------------RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQ--------VFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFS-----------MEVEE-SFYDELIAYVDHKVKRREL---------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2vz8B | 0.11 | 0.10 | 3.66 | 0.77 | MUSTER | NLNTVVAGGALFLGAHSSVAPRRPQEHLKPILEKFC-FTPHVESGCLAGNTALQEELQLCLLSGLLDAPALKACVDTALENMAS----------PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRN----PQALEAAQAKLEQLHVTQGQWDPANPAPADLLAVAVGNMAATLKEGFLLLHTLLSQDQWESLFAGASLHLVALKRSFYGSVLFLCRQQTPQDSPVFLSVEDTSFRWVDSLKDILADASSRPVWLMAVGCSTGVVGMVNCLRK | |||||||||||||
7 | 2oceA | 0.09 | 0.05 | 2.03 | 0.61 | CNFpred | --------------------------------------------------------------------------------------------GVLSASLKVGEEAP-GTLHPCEVMIAGLSNQGRAADKWLAEVVRWTWKVKLYTHLETD-------------LFGELRDGAEDEAISVFARNLHDLLLAA------PAGPRATLGLDPGL--RTGVKVAVVD---TGKLLDTATVYPHWDQTLAVLAALCAKHQVELIAIGNGASRETDKLAGELIKK | |||||||||||||
8 | 1vt4I | 0.11 | 0.10 | 3.74 | 0.97 | HHsearch-2 | YKDILVDNF-DCKD---VQDMPKSILIDHIIMSKDAVTLRLFWTLLSKQE-EM---V-QKFVEEVLR--INYKFLMSPIKTEQ----RQPS-MMTRMYIEQRDRDNQVFAKRLQPYLLELRPAKNVLILGSKTWVAMDFKIFWLNLKNCNSPLLYQIDPNWTSRS-DHSS-NIKLRIHSIQAELRRLLKSKPYAEYRKMFDRLSVFIWFDVIKSDVMVVVKYSLVEKQPKESTISIPSIYLEALHRSIVDHKTFDSDDLIPPYLDQYFYSHHLYKPYIC | |||||||||||||
9 | 2tmaA | 0.07 | 0.07 | 2.84 | 0.95 | Neff-PPAS | MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERA-EERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALND | |||||||||||||
10 | 1vt4I3 | 0.08 | 0.06 | 2.50 | 1.26 | HHsearch | ---------------------------EYALHRSIVDHYNIPK--TFDSDDLI----PPYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRH---DST----------AWNASGSILNTLQQLKFYAILDFLPKIEENL-----------ICS-KYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |