Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | LTSCEAELQELMKQIDIMVAHKKAEWEGQTQALEACLGVREQELSSARAALEEKHKEVGKLRQQLEDMEAAKQDLVREYEQQLKKFQEELARLRRSYEKLQKKQLREAREEATKRQGDDQCEMSRLSRKLEEFRQKSLDWEKQRLLYQQQVASLEAQRKALAEQSELIQQTQLASRKQILESVELASRSEIQHLTSKLERANDTICANELEVERLNMRVDDLTENNRMILEDQQRVAEELRQSKKMLEVLQDEKMELRATLQSQE |
1 | 6f1tX | 0.19 | 0.15 | 5.00 | 0.22 | HHWb | | ----------VIRQKDLVLAARLKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHEL---RRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQEL-----SEQNQRLLDQLSRASEVE----------RQLSMQVHALKEDFREKNSSTNQ-HIIRLESL-----------QAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKD-------LQLHQSQLELQEVRLSYRGGG |
2 | 3i9wA | 0.11 | 0.11 | 3.92 | 1.25 | SPARKS-K | | TMNMARQLSEASAWELFAAQNLTSMWQAQGRMLTAQSLKINALLQALRTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIEQDQR---------QAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAATTLTTVSQ-YSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRN |
3 | 2tmaA | 0.14 | 0.14 | 4.76 | 2.19 | FFAS-3D | | MDAIKKKMQMLKLDKE-NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAATDAEADVASLNRRIQLVEEELDRAQEATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKA-- |
4 | 6f1tX | 0.19 | 0.15 | 5.00 | 0.22 | HHpred | | ----------VIRQKDLVLAARLKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHEL---RRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQEL-----SEQNQRLLDQLSRASEVE----------RQLSMQVHALKEDFREKNSSTNQ-HIIRLESL-----------QAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKD-------LQLHQSQLELQEVRLSYRGGG |
5 | 5nnvA | 0.13 | 0.11 | 3.82 | 1.44 | MUSTER | | -------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELS--KQEAVFETLQAEVKQLRAQVKEKQQ----LSNELTELKIAAAKKEQACKGEEDNLAR-LKKELTETELALKEAKEDLSFLTSESS-----STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTT |
6 | 2tmaA | 0.13 | 0.13 | 4.44 | 1.12 | CNFpred | | MQMLKLDKENALDRAEQ-AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAVASLNRRIQLVEEELDRAQERLATALQKLEEAEK------ADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIELERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAIS |
7 | 6f1tX | 0.19 | 0.15 | 5.00 | 0.89 | HHsearch-2 | | ----------VIRQKDLVLAARLKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHEL---RRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQEL-----SEQNQRLLDQLSRASEVE----------RQLSMQVHALKEDFREKNSSTNQ-HIIRLESL-----------QAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKD-------LQLHQSQLELQEVRLSYRGGG |
8 | 5nnvA | 0.14 | 0.12 | 4.02 | 1.82 | Neff-PPAS | | ------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSSSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL-------------------------- |
9 | 6f1tX | 0.19 | 0.14 | 4.52 | 1.03 | HHsearch | | -------------------------------------------------VIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGR-VSELETDVKQLQDELERQQ---LHLREADREKTRAVQELSEQNQRLLDQLSRA-----SEVERQL-------SMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLEVRLSYRQL- |
10 | 6f1tX | 0.19 | 0.15 | 5.00 | 0.22 | HHWm | | ----------VIRQKDLVLAARLKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHEL---RRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQEL-----SEQNQRLLDQLSRASEVE----------RQLSMQVHALKEDFREKNSSTNQ-HIIRLESL-----------QAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKD-------LQLHQSQLELQEVRLSYRGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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