Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | RSYDVPSLCYNYHSPEANYQQEFLRPPAIPTVYQVIPMKYFTCVSGACDLIVSRLIGSERYFIYSSFLPADAISIENLLLVLMKKGYEDIASVLLVHLSVFYAPLLSASNAYVLSYLYPAYEKDYENAHRPSLSITWFFHLNIFPQYARYFYDVFYALMLYLFSIVPRGQKIEILLLFKPSNYKSYLLYIADSPLAHFYLLVFILESYVQYLFRVRGVGNPNFLNWSYLIFTCLFILERRWKILMKQK |
1 | 5u71A1 | 0.10 | 0.09 | 3.45 | 0.64 | SPARKS-K | | SLIFVLIWCLVIFEVAASLVVLWYVFYIYVGVADTLLLPLVHTLITVSKILHHKMLHSVLQAPMSTLFSKDIAILDDLPLTIFDFIQLLLIVIGAIAVVAVLQPYILRAYFLQTSQQLKQLESEGRS--------PIFTHLVTSLKGLWTLRAFQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILVGIILTLAMNI-----MSTLQWAVNSSIDVDSLMRSVSRVFKFI |
2 | 4eljA1 | 0.13 | 0.10 | 3.65 | 0.73 | FFAS-3D | | ------ALCQKLKIPDHVRERAW---LTWEKVSSVDGVLKKKELWGICIFIAAVDLDEMSF-TFTELQKNIEISVHKFFNLLKEIDTSTKVDNAMSRLL---------KKYDVLFALFSKLERTCELIYLTQLKVSWITFLLAKGEVLVISFQLMLCVLDYFIKLSPPMLL--KEPYKTAVIDTRIIEVLCKEEVANVAFVENLSKRYEEIYLKNKDLDARLFLD----------------------- |
3 | 3jbrA | 0.16 | 0.15 | 4.83 | 0.29 | HHpred | | ----LSSAALAAEDPIRAESVRNQDIATVEIVLKMTTYGAFRNYFNILDLLVSMGLESSTISVVKVLRPLRAINLKQCVFVAIRTIG-NIVLVTTLLVQLFFSCNFHFDNVSAMMSLFRAI-DSNEEDMGPVYNN---------RVEMAIFFIIYIILIAFMMNIEQGETEY-------PNPYQYQVWYVVTSSYFEYLMFALIMLNTICLGMQHYHQSMNHISDILNVAFTIIFTLEMILKLLAFK- |
4 | 2db0B | 0.12 | 0.10 | 3.60 | 0.67 | MUSTER | | ---DIREALANGEHLEKILIMAKYDESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLY---------EPMLKKLFSLLKKSEAIPLTQEIAKAFGQMA-----KEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLT--------------LNFIEAMGENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATLDKLRKVVIKRLEELN |
5 | 3rkoC | 0.10 | 0.08 | 2.96 | 1.03 | CNFpred | | ----------------------------LPDAHSQAPTAGSVDLAGILLKTAAYGL----LRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT--DIKRLIAYTSVSHMGFVLIAIYT---------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATGNFVGEFMILFGSFQV-----------VPVITVISTFGLVFASVYSLAMLHRA |
6 | 1vt4I3 | 0.18 | 0.10 | 3.16 | 0.82 | HHsearch-2 | | ----------------------------------------------------------------------------------------------------EYALHRS----IVDHYNIPKTFDSDDL-IPPYLDQYFYSHIHHLKNHPERM-TLFRMVFLDFFLEQKIRHDSTAGSILNTQQLKFYKPYICDNDPKYERLVNAILDFLPKIE------ENLICSKYTDLLRIALEDEAIFEEAHKQQR |
7 | 4plqA | 0.12 | 0.12 | 4.10 | 0.77 | Neff-PPAS | | -GSELPQMVQQLNSGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAG-----ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPN-------EQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAVKEA |
8 | 5oqkA | 0.10 | 0.03 | 1.06 | 0.35 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMRAPLDFRGMLRKLFSSHRFQVIIICLVVLDALLVLAEDKNNYAAMVFHYMSITILVFFMMEIIFKLFVFR- |
9 | 4fgvA | 0.10 | 0.10 | 3.69 | 0.64 | SP3 | | HTYD-EQLIKMFTEVLTTISNIIPLQMDLKATYPNSNSRDQEFIQNLALFLTSFFTMHLP-LIENLPNRDFLTHGHFYLIRISQIDDREIFKICLDYWLKLVQELYEEMQSLPLNDMSSMGLGMMSGGGAPN-----PALLEHYPLRKHKYKEVLSNLRVVMIEKMVRPEEVLIVEIVREFVKDTDSVQLYKTVYLTHLDVVDMEQIMTEKLARQVDGSEWSWHNCNVLCWAIGSISMAMNEETEKRF |
10 | 5cwmA | 0.08 | 0.07 | 2.87 | 0.87 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKA--LRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVL-------------------ELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRE-R |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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