>PF17007 (457 residues) NLKEKIFQFGIYGAKLGMLDGSEVEMVIGEPWVEIITADAVEGLKRNFTTDCLRTETNRF MVENFSWSDLYVRMGSLAWKDYLTSGTFNFTSKEYFLIMSLLIEARRYVDNVELRKLNLD PKKTHYCINRLARKGFIEYKTSEEAQKKNFIYKVRAIVDERGFVMRRVAEKQLLDTNRAD LPGKKRMFEYRIDIGLYDNIREMILNSKDGIITEDLKNKLGVSSKIGYKLLNKIFNEEKD AVTRTEEFKGRIRRYRYHVGTKSSEEAFQEGGDGTRTVGYITSEERVRAIRKLMSTSPIL QLDKRTYEKLQELTGWRYEFDRRTIIKSAVLAGFKIYKQKRGKEGKCSRYMIMRNEMVES DIRALDVSNCDFQESMSEFQRKIYNIFVNSPKFVEMDNGYIPLREERLKLLYRFLVNHMT SRGDESLRFDWEVVREMEFNLLLSIVPFNRIGFRESL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | NLKEKIFQFGIYGAKLGMLDGSEVEMVIGEPWVEIITADAVEGLKRNFTTDCLRTETNRFMVENFSWSDLYVRMGSLAWKDYLTSGTFNFTSKEYFLIMSLLIEARRYVDNVELRKLNLDPKKTHYCINRLARKGFIEYKTSEEAQKKNFIYKVRAIVDERGFVMRRVAEKQLLDTNRADLPGKKRMFEYRIDIGLYDNIREMILNSKDGIITEDLKNKLGVSSKIGYKLLNKIFNEEKDAVTRTEEFKGRIRRYRYHVGTKSSEEAFQEGGDGTRTVGYITSEERVRAIRKLMSTSPILQLDKRTYEKLQELTGWRYEFDRRTIIKSAVLAGFKIYKQKRGKEGKCSRYMIMRNEMVESDIRALDVSNCDFQESMSEFQRKIYNIFVNSPKFVEMDNGYIPLREERLKLLYRFLVNHMTSRGDESLRFDWEVVREMEFNLLLSIVPFNRIGFRESL | |||||||||||||||||||
1 | 1lvaA | 0.12 | 0.07 | 2.31 | 1.05 | CNFpred | ----------------------------------------------------------------------------------------------EKILAQIIQEHREGLDWQEAARASLSLEETRKLLQSMAAAGQVTLLRVE-----NDLYAISTE-----------------------------RYQAWW-QAVTRALEEFHSRYRPGLAREELRSRYFLPARVYQALLEEWSRE-----GRLQLA-----ANTVALAG--FTPSFSET-----------QKKLLKDLEDKYRVS---RWQPPSFKEVAGSF----NLDPSELEELLHYLVGVLVKIN--------DEFYWHRQ---ALGEAREVIKNLAST-----------GPFGLAEARDALG----SSRKYVLPLLEYLDQFTRRVGDKRVVVGN-------------------------- | |||||||||||||
2 | 5mqfM | 0.08 | 0.08 | 3.05 | 1.32 | Neff-PPAS | EYIEYLKSSDRLDEAAQRLAERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSRDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIASELGREEEDDVDLELRLARFEQLISRRPLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDKVNFKQVDDLASVWCQNYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLDLEESLGTFQSTKARIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWP------NVSDIWSTYLTKFIARYGGRKLERARDLFEQYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIGVTHTRGIYQKAIEVLSDEHAREMCLRFADMERAIYSFCSQICDPRTTGAF | |||||||||||||
3 | 6e9eA | 0.10 | 0.09 | 3.28 | 0.67 | SPARKS-K | DRADDLVNTLRSSLDKTTVYCKEADYLWKKY------RESIREVADALDGDNIKKLSKSIEIQEDKLRKCFISYAVSEFTKLIYLLTRFLSGKEINDLVTTLINKFDNIRLEIMDELGLDREGSTKYLAELVELNFVKSCSFDINAKRTMYRALDILGIESDKTEEDIEKMIDNILQIKKNNGRNFIASNVIDSRFKYLVRYIRETAKCKPAVRFVLNE--IPDAQIERYYEACREKLADMIAEI----------------KFENSDAGNYQKANVTSRTAEIKRKNQAIIRLYLTVMYIMLKVERDTKLYAESGLEVNIEKNKTNLTMAVMGVK----LENGIIKT-----------EFDKSFAEANRYLRNARWYKLILDNLKKSERAVVNEFRNTVCHLNAIRYFALYHYLIQKHLENRFADKKTYCKDFVKAYNLVRYKNLTIDGLFDKNYPG | |||||||||||||
4 | 5o9zG | 0.10 | 0.09 | 3.49 | 0.74 | FFAS-3D | -LWLALARLETYENARKVLNKAKLEEANGN-------TQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRIEEEDRKHTWMEDADSCVAHNALECARAIYALQVFPSVWLRAAYFEKNHGLLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSIALAFQANPNSEEIWLAAVKLESENDEYERARRLLAAPTARVFMKSVKLEWVQDIRAAQDLCEEALRHYEDMKGQIEEQKEMMEKAR-----EAYNQGLKKCPHSTPLWLLLQLTRARAILEKSRLKNPK---NPGLWLESVRLEYRAGLKNINTLMAKALQESGILWSEAIFRPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKITKAREWFH------RTVKIDSDLGDAWAFFYKFELQEVRKRCESAEPRHGEL-WCAVSKDIAKKIGDILRLVAGRIKNTF | |||||||||||||
5 | 6eu0P | 0.11 | 0.06 | 2.11 | 0.62 | HHpred | -------------------------------------------------------------------------------------------SDNAKTLHSQMMSGGALFTQQELQQMGGSLTDLMSIVQELLDKNLIKLVKQ--NDE--L--KFQGVLES-----------EA-----QK----------KATMAEEALVYSYIEAGREGIWSKTIKARTNLHQHVVLKCLKSLESQRY--VKSVKSVKFPTRK--IYMLYSLQPSVF--------TDGELDINSLLTIVWRFISENKNYSTTQEILEFITAAQVANVELTPSNIRSLCEVLDDKLEKVTHD--CYR----VTLESILQALEDEEEFSIFNYFKMFPA------------------------------------------------------------------------------- | |||||||||||||
6 | 5yz0A | 0.11 | 0.10 | 3.67 | 0.89 | MUSTER | SFLTELFQLGGL-QPASTFFSSFLELLKHLVE---MDTDQLKLYEEPL-SKLIKTLFPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLCHLLQYFLKFAGYESALQVRKVYV-RNICKALLDVLG----------IEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGLKNPVIEMLEG-IAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTKVLKSCRSLLESVQKLDLEATIDKVVKIYDAL----IYMQVNSSFEDHILEDLCGYSHSDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVTLFPRR--IFLEWRTAVYNWALQSSHEVIRASCVSLQQQNSCNRVPKILIDKVKDDSDIVKKEF | |||||||||||||
7 | 4r6iA | 0.08 | 0.05 | 2.12 | 0.92 | CNFpred | ----------------------------------------------------------------------------------------------LINLLHFINEQNRWFTIKELSYLQVADKTVRKYLKLLEDEISWNLLVQ-------KGKGIYLKKPLNESL--------------------SFVESKILRKSLNLQICEELVFK--KNSMQSLAQKLHLQVGALYPIINQINYDISSHLNIKKK------PLEISGR----------------------EQDVRVFMLRLYCNIPYWP-KQNITDLINKMEKLNVQMYTYSKHKLCVLFAITISRLLS----GNTIDNVSGLILVNKNDDHYKTVAS-----ITSELQNSFGVTLHETEISFLALALLL-YKKTIMPLAKEITKGIEHKLQLGINYDESFLTYVVLIIKKALDKNFIQYYNYNI | |||||||||||||
8 | 5aimA | 0.19 | 0.04 | 1.20 | 0.61 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMSARSLRSLQRQRAILKVMNTIGVAYLREQFYESVSKYMG--STLDKKTVRGDVDLMELGARTEP----V-SGRKIIFLPTVG--EDAIQRYILKEK------------------------------------------------------------------------------------- | |||||||||||||
9 | 5lj3T | 0.06 | 0.06 | 2.51 | 1.24 | Neff-PPAS | EIQKTPQNILTWKRYIEYWKDKQIRWLYERTDTSIWEESETSRIFWLF-QRCLKSCVRDCDRICLSYLELAIEMIRHALASSLMKMEMHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILERYQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFLILSLAKYYIGRLDSCNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARKLWTQSLKVPYP------------YIEDLEEIYLNWADRELDHVPTNPEILLSLRIWSKYIDYLEAYIFNKTKMA-YNTVIDLRPAMAENFALFLQNYEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSHP | |||||||||||||
10 | 5aimA | 0.19 | 0.04 | 1.20 | 0.68 | HHsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AM-ASARSLRSLQRQRAILKVMNTIGVAYLREQFYESVSKYMG--STLDKKTVRGDVDLMELGARTEP----V-SGRKIIFLPTV---GEDIQRYILKEK------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |