Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | SEVYTVDLNPRGSMVAYGGGNDRCTVMDLETGDVVSIVENFGDSVIFCKFIDGEKLLVGSLDGTISLMTLEEEINNVSVNEDISKIKVDKDKLLVGTTRGNVHLFSLDLCIQNVCIGQYSEIQDMCYESGRVYTLSETNFMVFDAESHRKLMDLHVRGGSAIGKMPSSDVVCLGLEGCIVVRKNAHLLGRIEVDGSPECILYMNNYFIVGGDFDYILLINMPMSMRTFKIPVGVEGISDIRGDGENRIAFSTCNGAVGYGDIRDEKSFKLIEGGVGCIFDMCFKGDTIYVGGEHGFNAL |
1 | 5nnzB | 0.16 | 0.16 | 5.42 | 2.45 | SPARKS-K | | LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNYGDKIATGSFDKTCKLWSVETGKHTFRGHTEIVCLSFNSTLVATGSMDTTAKLWDINGEEVYTLRGHSAEIISFNTSGDRIITGSFHTVVVWDADTGRKVNILIGAEISSASFNWDCSLILTGSMDKTKLWDNGKCVATLTGHDEILDSCFDGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGVITGSKDNTCRI |
2 | 2ynpA1 | 0.16 | 0.14 | 4.76 | 2.66 | FFAS-3D | | DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIRKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHSIAVHPTKPYVLSGSDDLTVKLWNWENNLEQTFEGHEHFVMCVAFDPSTFASGCDRTVKVWSLGQSTPNFTLQERGVNYVDYYPLPD----------------------------------KPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGIASGFDNG---- |
3 | 5nnzB | 0.16 | 0.16 | 5.42 | 5.14 | HHpred | | LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNYGDKIATGSFDKTCKLWSVETGYHTFRGHAEIVCLSFQSTLVATGSMDTTAKLWDIQGEEVYTLRGHSAEIISFNTSGDRIITGSFHTVVVWDADTGRKVNILICAEISSASFNWDCSLILTGSMDKTKLATNGKCVATLTGHDEILDSCFDGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGVITGSKDNTCRI |
4 | 5nnzB | 0.16 | 0.16 | 5.33 | 2.31 | MUSTER | | LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNYGDKIATGSFDKTCKLWSVETGYHTFRGHTACLSFNPQSTLVATGSMDTTAKLWDIQNGEVYTLRGHSAEIISLSFSGDRIITGSDHTVVVWDADTGRKVNILIGHEISSASFNWDCSLILTGSMDKTCKL-NGKCVATLTGHDEILDSCFDGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGVITGSKDNTCRI |
5 | 5mzhA | 0.16 | 0.16 | 5.24 | 4.03 | CNFpred | | LPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNGDKIVTGSFDKTCKLWDAYTGQLYYTL-TEIVCLSFNPTIIATGSMDNTAKLWDVEGQERATLAGHRAEIVSLGFGGDLIVTGSFHDSRLWDVRTGQCVHVLSG-EVSSTQFNYAGTLVVSGSIDCSRLWDVGRCLSVKQGTDEVLDVAFDGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNGDFIITGSKDNTCRI |
6 | 3iytA3 | 0.13 | 0.13 | 4.42 | 0.45 | HHsearch-2 | | KAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSDDRFIATCSVDKKVKIWNSMTGVHTYDEHEQVNCCHFSHLLLATGSSDCFLKLWDLNKECRNTMFGHTNSVNHFSPDDKLLASCSAGTLKLWDATSANERKSINVKQ-FFLNLEDPQERIMVAA-KNKFLIHTSGLLGEHTGHSTIQYCDFSNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSFLTSSDDQTIRLWETKKVCKN-SAVMNGTNLKKIHVSPDFYVTVDNLGILYI |
7 | 6g6mA | 0.14 | 0.14 | 4.69 | 1.69 | Neff-PPAS | | SAVTSLQFNDN--IVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFND-NIVVSGSDDSTVKVWDIKQSLRTLQGHQSVTSLQFNDNIVVSGSDDSTVKVWDIKTGSLRTLQGHQSAVTSLQFNDNIVVSGSDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFNDNIVVSGSDDSVWDIKTGQSLRTLQGHSAVTSLQFNDNIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFND-NIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFNDNIVVSGSDDSIKG- |
8 | 3iytA3 | 0.13 | 0.13 | 4.42 | 0.74 | HHsearch | | KAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSDDRFIATCSVDKKVKIWNSMTGVHTYDEHEQVNCCHFSHLLLATGSSDCFLKLWDLNKECRNTMFGHTNSVNHFSPDDKLLASCSAGTLKLWDATSANERKSINVKQ-FFLNLEDPQERIMVAA-KNKFLIHTSGLLGEHTGHSTIQYCDFSNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSFLTSSDDQTIRLWETKKVCKN-SAVMNGTNLKKIHVSPDFYVTVDNLGILY- |
9 | 5nnzB | 0.16 | 0.16 | 5.42 | 2.38 | PROSPECTOR2 | | LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNYGDKIATGSFDKTCKLWSVETGYHTFRGHAEIVCLSFNSTLVATGSMDTTAKLWDIQGEEVYTLRGHSAEIISFNTSGDRIITGSFHTVVVWDADTGRKVNILICAEISSASFNWDCSLILTGSMDKTKLATNGKCVATLTGHDEILDSCFDGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGVITGSKDNTCRI |
10 | 3iytA3 | 0.13 | 0.12 | 4.30 | 4.25 | SAM | | --VYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSDDRFIATCSVDKKVKIWNSMTGVHTYDEHEQVNCCHFSHLLLATGSSDCFLKLWDLNKECRNTMFGHTNSVNHFSPDDKLLASCSAGTLKLWDATSANERKSIN--QF-FLNLEDPQERIMVAA-KNKFLIHTSGLLGEHTGHSTIQYCDFSNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSFLTSSDDQTIRLWETKKVCKNS-AVMNGTNLKKIHVSPDFKTYVTVLG---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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