Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | TWDYINLDDFKSSSCFTGFSYFLVWVFLGVSIAVYGVDTFTAVNLLVFNKWSSQIQPKIPFSISRWIFAGCIIASFVLLAYRWIRAVRVMRTGSVAESYLDPLAVRVQSIRIGKSKGYRRFLVFAELTKSKKGADYVALFTYFSFESWLRVIFADGPRQVINAITLYSVMELDLIPTGSNAAPAGTSSVAQFFINVEALAEKNYQQAVILFGMLFTLIIWVIAALSLISSVILYLIFLWHHIPTMDGSLKRYCRRKINTR |
1 | 4zwjA | 0.13 | 0.12 | 4.15 | 0.90 | SPARKS-K | | INFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHG-YFV-----FGPTNLQGFFATLGGEIALWSLVVLAIERYVVVCK---PMSNFRTWVMALACAAPPLAGWSRYIPEGLQC---------SCGIDYYTFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAQQESATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNVI |
2 | 1pw4A2 | 0.12 | 0.09 | 3.15 | 0.81 | FFAS-3D | | TAKQIFMQYVLPN----KLLWYIAIANVFVYLLRYGILDWSPTYL--------KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRTGVFFMTLVTIATIVYWMNPAGN----------------------------PTVDMICMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAGFTGLFGYLG------GSVAASAIVGYTGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE--------- |
3 | 2pffA1 | 0.17 | 0.11 | 3.66 | 0.36 | HHpred | | ----------------------------------DVEALIEFIYDTEKNGGLGWLDAIIPHIDSKSEFAHRIMLTNILRMMKKQKSARGIETRPASESSLETLFNRWHSES-----WANQLTVCGAIIGWTEGIEKMGVRTFSQKEMAFNLLGLLTPEVVE----LC----QKSPVMADLNGLQFVPELKEFTAKLRELVETEVRKAVSIETALE--------------------------------------------- |
4 | 4djiA | 0.12 | 0.11 | 3.82 | 0.67 | MUSTER | | AW----VSNT----LGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSY---ILKWPALNEDPITKTIAALIILWALALTQFYTARIAKVGFFAGILLPAFILIALAAIYLHSGIEMDSKTF-----FPDFSKVGTLVVFVFILSYMGVEASTHVNNPLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAA---FA-----KMNKN |
5 | 3rkoB | 0.09 | 0.07 | 2.67 | 1.13 | CNFpred | | ---------------------MWATLMLLGGAVGKSAQLPLQTWLADAM--------AGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMS-----QIGYMFLALGAWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLSIPLVYLCFLGGAALSALLVTAGFFSKDEILAGAMMVAGLVGAFMTSLYTFRMIFIVFH----------------- |
6 | 1vt4I3 | 0.15 | 0.07 | 2.47 | 0.81 | HHsearch-2 | | -------------------------------------------------------------------------------------------EYALHRSIVDNIPKTFDSDDLI--PPYLDQYFYSHIGHHLKNIEHPERMTLFRM------VFLD-FRFLEQ------KIRHD--STAWNASGSILNTLQQLKFYKPYICDNDKYERLVNAI----------------------LDFLPKIENLICSKYTDLLREEAHKQ |
7 | 4d49A | 0.07 | 0.07 | 2.65 | 0.74 | Neff-PPAS | | ------VQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAGALSPLVKLDASEEVIKEAVWAIANIASGNNEQIQKLIEAG------------------ALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAG------ALSPLVKLLDDASEEVIKEAVWAIANIASGNNEMKQKLEEAGALPALEKLQSHANEEVQKNAQAALEAF |
8 | 3mseB1 | 0.11 | 0.02 | 0.55 | 0.27 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVIN-NH------------------------------------ |
9 | 3m16A | 0.11 | 0.10 | 3.57 | 0.64 | SP3 | | TGDIEAIKQFKLANYQHLIEEAIDWALQIKGNKNSQTTLENVGDKLAV-NIGCEVLTSIPRKLIRLYQDAGIDSDRILITWEGIQAAKILEAEGIHCNF--HFAQAQACAEAGT----TLISPFDWYKANSGQSEYSASEDVVSVTEIYNFYKSHGTGEIEEPELLAQLEADTSPLEQKLFPIKETKDTPELLTEASFRWANNDPAHDKLADGIRRFAADQVTLESLSKKISQR-------------------------- |
10 | 5zkpA | 0.08 | 0.08 | 3.18 | 0.89 | PROSPECTOR2 | | SSHMDSFARLYPCKKFNEIKIFMVNVAGCLFFINTYCSVAFASYFLILDSFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQAGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAIADLWMACTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQLTEKFYSMRSSR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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