Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | WLGSLIATIIGNLKVSISNVHIRYEDSTSNPGHPFASGITLARLAAVTMDEEGNETFDTSGALDKLRKSLQLERLALYHDSNSSPWEIEKQWDYISTEEWVKMFEDGIKEKTEHNGKSKWALNRRYLLSPINGSLKYHRLGNQERNNQETPFERASVNINDVNVTITEEQYHDWIKLVEVVSRYKTYIEISHLRPMVPVSEAPRLWWRFASQASLQQKRLCYRFSWDRIHHLCQLRRRYIQLYT |
1 | 6cbcB | 0.29 | 0.20 | 6.11 | 1.54 | SPARKS-K | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFIT--SIQSAHKLATLESLAIYWDTDAKL-IGPGREHL-------KFFRE------------IASSEHQFILKPVSGQAKIEIDKTG---SHTVPRYKANLLFDEIGVVLDDQQYRDAL--VDLFHYFIRHQEYKKFQ-------------------------------------------------- |
2 | 6cbcB | 0.30 | 0.20 | 6.10 | 1.34 | FFAS-3D | | --QALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSI--QSAHKLATLESLAIYWDTDAKLIGPG--------------------REHLKFFREIASSEHQFILKPVSGQAKIEIDKTG---SHTVPRYKANLLFDEIGVVLDDQQYRDA--LVDLFHYFIRHQEYKKFQ-------------------------------------------------- |
3 | 6cbcB | 0.30 | 0.20 | 6.22 | 3.56 | HHpred | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSIQ--SAHKLATLESLAIYWDTDAKLIGPGREHL--------KFFRE------------IASSEHQFILKPVSGQAKIEIDKTGS---HTVPRYKANLLFDEIGVVLDDQQYRDAL--VDLFHYFIRHQEYKKFQ-------------------------------------------------- |
4 | 6cbcB | 0.30 | 0.20 | 6.22 | 1.61 | MUSTER | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSI--QSAHKLATLESLAIYWDTDAKLIGPGREH--------LKFFREI------------ASSEHQFILKPVSGQAKIEIDKTG---SHTVPRYKANLLFDEIGVVLDDQQYRDAL--VDLFHYFIRHQEYKKFQ-------------------------------------------------- |
5 | 3efoB | 0.08 | 0.05 | 1.94 | 0.68 | CNFpred | | DRQQFLNDLRNDIKKIGFDAIMRVRT---------STGFRATDFFGGILMNN----------DVEMAAIDCDKAVTVEFKHDDKLSE-----------------------------------DSGALIQ---CAVLYTTI-----------SGQRRLRIHNLGLNCSS----QLADLYKSC--------------------ETDALINFFAKSAFKAVLH---QPLKVIRELVNQTAHMLACYR |
6 | 6cbcB | 0.30 | 0.20 | 6.22 | 4.68 | HHsearch-2 | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSI-Q-SAHKLATLESLAIYWDTDAKLIGPG------REHL--KFFRE------------IASSEHQFILKPVSGQAKIEIDKTGS---HTVPRYKANLLFDEIGVVLDDQQYRDAL--VDLFHYFIRHQEYKKFQ-------------------------------------------------- |
7 | 6cbcB | 0.30 | 0.20 | 6.22 | 1.94 | Neff-PPAS | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSI--QSAHKLATLESLAIYWDTDAKLIGPGREHLKFFREI--------------------ASSEHQFILKPVSGQAKIEIDKTG---SHTVPRYKANLLFDEIGVVLDDQQYRDA--LVDLFHYFIRHQEYKKFQ-------------------------------------------------- |
8 | 6cbcB | 0.30 | 0.20 | 6.22 | 6.57 | HHsearch | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITS-IQ-SAHKLATLESLAIYWDTDAKLIGPG------REHL--KFFRE------------IASSEHQFILKPVSGQAKIEIDKTGS---HTVPRYKANLLFDEIGVVLDDQQYRDAL--VDLFHYFIRHQEYKKFQ-------------------------------------------------- |
9 | 6cbcB | 0.29 | 0.20 | 6.00 | 2.39 | SP3 | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSIQ--SAHKLATLESLAIYWDTDAKLIGPGRE--------------------HLKFFREIASSEHQFILKPVSGQAKIEIDKTG---SHTVPRYKANLLFDEIGVVLDDQQYRDAL--VDLFHYFIRHQEYKKFQ-------------------------------------------------- |
10 | 6cbcA | 0.32 | 0.22 | 6.54 | 1.93 | PROSPECTOR2 | | FAQALVTKIVDNLQITIRNIHIRYEDAISAPGHPFALGITLEEFSAVSTDSDWTPAFITSI--QSAHKLATLESLAIYWDTDAKEHDELKFFREIS--------------------------EHQFILKPVSGQAKIEIDKTG---SHTVPRYKANLLFDEIGVVLDDQQYRDA--LVDLFHYFIRHQEYKKFQPKG----------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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