Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ESQGIQYIWAMNIAQQGYYAENGDFTDTIPNLGSSIPTQTANYNYSISKGNQAVFNYATAREPNLKSFVGGVFLVGDEIQTILCQANVADTTKPANPINDNGVLLCG |
1 | 2m3kA | 0.13 | 0.13 | 4.50 | 1.38 | SPARKS-K | | INAVRAALLENAHFMEKFYLQNGRFKQT-STKWPSLPKEAEGFCIRLNALDSKFMLKAVAIDKDKNPFI--IKMNENLVTFICKKSASSSDGLDYFKGNDKDCKLFK |
2 | 1ay2A | 0.14 | 0.14 | 4.79 | 1.10 | MUSTER | | VSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPDIKGKYVKEVEVKNGVVTATMLSSNNEIKGKKLSLWARRENSVKWFCGQPTRTDDDTVADAKDGKEITCR |
3 | 2m3kA | 0.12 | 0.11 | 3.98 | 1.11 | HHsearch-2 | | INAVRAALLENAHFMEKFYLQNGRFKQTSTKWP-SLPIEAEGFCIRLNGIDSKFMLKAVAIDKDKN--PFIIKMNE-NLVTFICKKSASSCSD-GLDYFKGNDKDCK |
4 | 2nbaA | 0.11 | 0.10 | 3.75 | 1.74 | Neff-PPAS | | -RAAHAALLENARFMEQFYAKKGSFKLTSTKWPELPVKEAGGFCIRMSGLEGKFTLKAVALDREAEP--RVLRLNESLTAVVCGKMKGKGSCTDGEEIFRGNDAECR |
5 | 4noaA | 0.18 | 0.16 | 5.17 | 1.54 | HHsearch | | RTEGQALLSDAAARQERYYSQNPGVGKDVAKLG-SSASPNNLYNLTIATTSTTYTLTATPINSQTDKTCGKLTLNQLG---ERGAAGKTGNN--STVN------DC- |
6 | 2nbaA | 0.10 | 0.10 | 3.76 | 1.19 | SPARKS-K | | LRAAHAALLENARFMEQFYAKKGSFKLTSTKWPELPVKEAGGFCIRMSGQEGKFTLKAVALDREAEPRVLRLNESLTAVVCGKMKGKGSCTDGEEIFR--GNDAECR |
7 | 2m3kA | 0.12 | 0.11 | 3.98 | 1.08 | MUSTER | | INAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNALDSKFMLKAVAIDKDKNP--FIIKMNEN--VTFICKKSASSCSDGLDYFKGNDK-DCK |
8 | 2nbaA | 0.13 | 0.12 | 4.24 | 1.11 | HHsearch-2 | | LRAAHAALLENARFMEQFYAKKGSFKLTSTKWPE-LPKEAGGFCIRMSGQEGKFTLKAVALDREAE--PRVLRLNES-LTAVVCGKMGKGSCTDGEEIFRGNDAECR |
9 | 2m3kA | 0.12 | 0.11 | 3.99 | 1.69 | Neff-PPAS | | INAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIDSKFMLKAVAIDKDK---NPFIIKMNENLVTFICK-KSASSCSDGLDYFKGNDKDCK |
10 | 4d40A | 0.16 | 0.12 | 4.02 | 1.34 | HHsearch | | RFDAQQYLVTSAQALERHYSRNGLYPASQS-----LA-NSPYYSFSYTPDKFGFSLKAVPT-NRQSDPCGTLSLDHKG---VRVP---A--------------TNC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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