>PF16502 (621 residues) AVAAEWNAYRARLYDALALGVAGKTTAGAGVAQQTFKRFEGASGEWGAHEQLEATNESNY ESFEEHLGGLRSALSEGSIDEARSMASQADQNLLAAQRGRVDGPVIDALSIALYGVRTRD VAMLAAADSTEAAATVGESVLEDFENASVHDAVEEASSELYEAFEGGLKSAVSAAEKDDA EAAKTQAEKAFGAALSAGYELAPEKVAGVAELAALQSVGFDAAAVANLGGPGTEYAHAAS LTRYRARVYDVDWLAARGESDAAEKMAKDVFADFEGARAHEALEEADHDAYESFEGGLSD LRKAIKNGDAEARASAVESIDAALLAGIEALVGGEASAVLESAFFRARFADANERYQRGE NDVAAEIAQHLFERFEVNEAGFHETVEETSEDIYHRFEEEHLSALITAYKNGDDEAVTKH HEGVLSTLVEFESMIGTAYSAPAESAFMAARAFDAAALATLGQSDRAASVIKSAFTAFEK DTGGFHESLEHADHDLYESFESELSAVRSAANDGGDVFAAATAYETKAVDAIYAVVASGS GELSGVAAGIVQAAFQYFEGATVHELLEEADKGAYETFEAKIRDLKSALESGSEVTVALN AYADATTTAQFAVAGAIENAP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AVAAEWNAYRARLYDALALGVAGKTTAGAGVAQQTFKRFEGASGEWGAHEQLEATNESNYESFEEHLGGLRSALSEGSIDEARSMASQADQNLLAAQRGRVDGPVIDALSIALYGVRTRDVAMLAAADSTEAAATVGESVLEDFENASVHDAVEEASSELYEAFEGGLKSAVSAAEKDDAEAAKTQAEKAFGAALSAGYELAPEKVAGVAELAALQSVGFDAAAVANLGGPGTEYAHAASLTRYRARVYDVDWLAARGESDAAEKMAKDVFADFEGARAHEALEEADHDAYESFEGGLSDLRKAIKNGDAEARASAVESIDAALLAGIEALVGGEASAVLESAFFRARFADANERYQRGENDVAAEIAQHLFERFEVNEAGFHETVEETSEDIYHRFEEEHLSALITAYKNGDDEAVTKHHEGVLSTLVEFESMIGTAYSAPAESAFMAARAFDAAALATLGQSDRAASVIKSAFTAFEKDTGGFHESLEHADHDLYESFESELSAVRSAANDGGDVFAAATAYETKAVDAIYAVVASGSGELSGVAAGIVQAAFQYFEGATVHELLEEADKGAYETFEAKIRDLKSALESGSEVTVALNAYADATTTAQFAVAGAIENAP | |||||||||||||||||||
1 | 4xriA | 0.09 | 0.09 | 3.35 | 1.19 | SPARKS-K | ALQAKWLNTRTRVKQLALETLASPNSKAGQAAAQVIAAIAAIELPRNQVRNASEGGQHQKQASLTAIGFICETQDTDLRNSLVGHSNAILTAVVQGARKEEPNNEVRFAAITALGDSLEFVGN--NFKHEGERNYIMQVVCEATAQD------SRIQQGAFGCLNRIMALYYEHMR----YYMEKALFGLTILGMKSDDE--DVAKLAVEFWSTVCEEEIAIEDDNAQVESMRPFYNFARVATNEVVPVLLQLLTKQDESRAAYQCLQLYAQAVGSTPVIQFVEHNLHADWHFRDAAVSAFGAIMDGPEEKVLEPIVKTGMQPLIAMMEDES-----IQVRDSTAYALGRITEACSEAIDNTHLEPLIRSLFNGLMNAQNPLTPHFNQSVTNLLTVTRTAAYEVLSVFVQNAALSAVASLSTVILQRLEETLPLQQQVEDKLILEDMQTSLCTVLQATVQRLDAPQGDRIMQVLLQILSTCGSSVPEGVFAAEEEFAKYMEAFAPFLYNALGNQEE-----PSLCSMAIGLVSDVTRSLGERSQPYCDNFMNYLLGNLFKPAILQCFGDIASAIGGHFETYLTIVAQVLQQAATIIDYVISLREGIMDAWGGIIGAMKTSN | |||||||||||||
2 | 4iggA | 0.11 | 0.11 | 3.83 | 2.02 | FFAS-3D | ------QFLKEELVAAVE-----DVRKQGDLMKAAAGEFADDPCSSVKRGNMV----RAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKNIMAAKRQQEDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDELAYALNNFDKQIIVDPLSFSEERFRPSLE-ERLESIISGAALMADSSCTRDDRRIVAECNAVRQALQDLLSEYMGNRSDALNSAIDKMTKKTR--DLRRQLRKAVDHVSDSFNVPLLVLIEAAKNGNEKEVKEYAQVFREHLIEVANLACSNNEEGVKLVRMSASQLEAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVV-TSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPRAIMAQLPQEQKAKIAEQVASFQEEKSSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAE--AGSRMDKLGRTPDSACKQDLLAYLQRIALYCHLVVSGVDSAMSLIQAAKNLMNAVVQTVKAS- | |||||||||||||
3 | 3dzaA | 0.17 | 0.04 | 1.38 | 0.41 | HHpred | ------------------------------------------TQVQKEAADVLQVAVQGANA--RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWA-----------K---------FVKTDAKA--------------KIADLSEDYVAT-PEK----ESAIQSANEKLAKGDQKGAIDTLRLAG---------------------------------------IGVIENQYLPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 1st6A | 0.12 | 0.12 | 4.15 | 1.39 | MUSTER | ERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTKSQ--GIEEALKNRNFTVEKMSAEINEIIRVLQTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLREQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTQLADLRARGQMQKAQQVSQGLDLLTAKVENAKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVGVGQAAIRGLVAEGRRLANVMMGPYRQDLLAKCDRVDQLAAQLADLAEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFSD-TTTPIKLLAVAATAPSEERAANFENHAARLGATAEKAAAVGTANKTTVEGIQATVKSARELTPQ---VSAARILQAAYEHFET----MKNQWIDNVEKMTGLVDEDTKSLLDASEEA--IKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEFREAVKAASDELSKTISPMVMDAKAVAGNDPGLQKSFLDSGYRILGAVAKVREAFQPQE | |||||||||||||
5 | 4bujB | 0.09 | 0.08 | 3.16 | 1.39 | CNFpred | ----EESDSIEWFQSALRVDP-----NDVESWVGLGQAYHACGRIEASIKVFDKAIQPSHTFAQYFKAISLCDV--GEYLESLDILEKVCQEAA-----------EESFQIGLVEVLMRCSLDLYSQGFLLKSVSIAKDTIERIKII--ISELKCENQQVWIYLSQVLRLFIWIVDTLPVESLVSIFENS-SEEIDSVDNIKIDTLL-DNVSIACKFLILASKYSVSDQKFTDGTVRASYWYNIGISELTAFITLKPQYRDAAIFAFKKSIQLQSTSETWIGLGIAMDINFRVSQHCFIKATALEP-KATNTWFNLAMLGAQQVLNKLQSLA----------QDSSPWLGMALILEEQGDIIGSSKLFAHSFILSNG-----------RSKAAQFMYAKNVLENHINNGDDERDIETVEKLTTASIALEQFFKKSP----------SQFALQCALLTLERLHHYENANELANRLIGILEK-------KFEKTDERELFNFAIIKGQFARIHLGLGNFELSIENADLSQNHICLGLSYFFLNDFDQTLNQFQELLSISKDSKHLVVLIAKVLYGESDTKEIALQELTEYIATSGADLLVTLTIAAMSIDKREDLSIILEELK | |||||||||||||
6 | 3u8vA | 0.11 | 0.01 | 0.52 | 0.52 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------SGHTAHVDEAVKHAEEAVAHGKEGHTDQLLEHAKESL------------------THAKAAST----------------------HVGHGIKHLEDAIKHGEEGHVGVATKHAQEAIEHLRAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5lj3T | 0.07 | 0.07 | 2.73 | 1.68 | Neff-PPAS | -------------LTWKRYIEYWKDKQIRWLYERFCSQFVTDTSIWEDYIRWESETSRIFWLFQRCLKSCVRDCDRICLSYLELAIEMIRHALASSLMKMEMH-RKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILER-YQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFLILSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSA-----AEKCNVYSEAILKIDPRKVGTPGS------FGRLWCSYGDLYWRSNAISTARKLWTQSLKVPYPYIEDLEEIYLNWATNPEILLSLRIWSKYIDYLEAYIFNKTKMAYNTVIDLRPAMAENFALFLQNYE-----VMESFQVYEKTIPLFPPEIQYELWIEYLEVATSRFLFEKALKNLCSNGIDCKTIFIAYSVFEERS--KSIEILRRGAVIGLESRLQLWRMCISKAESVTRELYQECIQILEFVIKFSDFESRAREILAYGAKLNTELWDSFEIFELK-------------------------- | |||||||||||||
8 | 3dzaA | 0.17 | 0.05 | 1.48 | 0.71 | HHsearch | -----------------------APAAAATT------------QVQKEAADVLQVAVQGANA--RDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWA-----------K---------FVKTDAKA--------------KIADLSEDYVAT-PEK----ESAIQSANEKLAKGDQKGAIDTLRLAG---------------------------------------IGVIENQYLPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEEGIVVDSEL--V-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5ifeC | 0.08 | 0.08 | 3.17 | 1.76 | PROSPECTOR2 | NLEQKERKIMKLLLKIKQITDKAREFGAGPLFNQILPLLMSPTLEDQEDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNTMISTMRPDIDYVRNTTARAFAVVASALGIPSLLPSKKSWQARHTGIKIVQQIAILMGCAIAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISREAEQYRKMVMETIEKIMGNLGAADID--HKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLAKVRQQAADLISRTAVVMKTCQEEKLMGLGEEYPEVLGSIIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRTLQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEY---IGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHTSPHVIQAVMGALEGLRVAIGPCFHPARKVRDVYWKIYNSIYIGSQDADYIL | |||||||||||||
10 | 3u8vA | 0.15 | 0.02 | 0.54 | 0.18 | SAM | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEEAVAHGKEGHTDQLLEHAKESLTHAKA-----------------THVG-HGIKHLEDAIKHGEEGHVGVATKHAQEAIEHLR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |