Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | GGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDDRD |
1 | 5cqcA2 | 0.10 | 0.10 | 3.51 | 0.72 | SPARKS-K | | ----VQLSEFIVALEDYGKLRSQQYSK-TAKLTAVELLIGILNDIKSQYDKLVKEVDCLMDLGKLVQFHLKNLAESQKLVLPCV |
2 | 4ui9O1 | 0.11 | 0.08 | 3.02 | 0.73 | FFAS-3D | | -----ELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHM--ILAYSKLSFSQVFKLYTAL-QQYFQSDENK----------- |
3 | 1xszA | 0.18 | 0.15 | 5.02 | 0.33 | HHpred | | --------SPNEEIAEFFHQRNLDSQMNFNGQSFVEGLRTFLKTFKLP-GEAQKIDRLVQSFSGAYFQQNPDVVSNDAAY---- |
4 | 6h8qA | 0.14 | 0.13 | 4.46 | 0.66 | MUSTER | | IG---YETELKKITDKTIKAFMDSTIGNSKVDMKYDIFAKFIHHIH---FEKKELQEKFLNQIATLKIHLKKQEKMDPNNSRDD |
5 | 5gheA | 0.10 | 0.08 | 3.11 | 0.49 | CNFpred | | --------HIKNQIDEIKKQLDS----AQHDLDRDVKIIGMLNSINTDIDNLYSQGQEAIKVFQKLQGIWATGAQIENLRTTSL |
6 | 1jqoA1 | 0.17 | 0.10 | 3.14 | 0.35 | HHsearch-2 | | ESSFTSIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQ-VFTFGLSL----------------------------------- |
7 | 4tqlA2 | 0.12 | 0.11 | 3.76 | 0.78 | Neff-PPAS | | -----LYDEAKKKIEQMIQQIKQG----GDKQKMEELLKRAKEEMKKVKDKMEKAKQVAEELIKKILQLIEKKEIAEKVLKG-- |
8 | 4oiyA1 | 0.14 | 0.12 | 4.05 | 0.43 | HHsearch | | KGFLK-D-DSPISIAKWLLETGEGDEFDFTGMSIVDALRSFLQSFRLP-GEGQKIDRFMLKFAERFVDQNPGV----------- |
9 | 2fu2A | 0.10 | 0.08 | 3.07 | 0.71 | SP3 | | -----------PSEKEILDALSKSEQVIQADDYFRQAIFELASQLEKE--GSSLLATKIDSLINQYILTHQFDAPSRLVKTK-- |
10 | 1w9rA | 0.11 | 0.11 | 3.89 | 0.47 | PROSPECTOR2 | | GSHMPEKEEAKKKAEDQKEEDRRNYPTNTYKVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATKRKAAEEDKVKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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