Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | GWIRIKIKEDAAPLRAGVFTRGAMESGNEDMDRIAAELGATEVRRVFSDGGRFAERRRRYGLHLWYDVRFDESVPVSRAADRFATIDGVEYIEPVYVIKSTDADAVYVPDNVIYTPSVAVTRTEMPFNDPMLSQQWHYNNEG |
1 | 1r6vA | 0.16 | 0.12 | 3.99 | 1.16 | SPARKS-K | | GKILVGYND------------------RSEVDKIVKAVNGKVVLELIK----------------VVSIKLN-GMTVKQAYDKILALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG |
2 | 1r6vA | 0.16 | 0.12 | 4.00 | 1.24 | CNFpred | | GKILVGYND------------------RSEVDKIVKAVNGKVVLELP--------------QIKVVSIKLN-GMTVKQAYDKIKALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG |
3 | 1r6vA | 0.16 | 0.12 | 3.99 | 1.90 | HHsearch-2 | | GKILVGYNDREV-------------------DKIVKAVNGKVVLEL-P-------------QIKVVSIKLNG-MTVKQAYDKIKALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG |
4 | 1r6vA1 | 0.21 | 0.09 | 2.92 | 2.05 | HHsearch | | GKILVGYNDREV-------------------DKIVKAVNGKVVLEL--------------PQIKVVSIKLNGM-TVKQAYDKILALKGIRYVEPSYK--------------------------------------------- |
5 | 3co0P | 0.13 | 0.06 | 2.20 | 0.87 | SPARKS-K | | KKYIVGFKQGF--------------KSCAKKEDVISEKGG-KLQKCFKYVD-------------AASATLN-----EKAVEELKKDPSVAYVEEDKLYRALSA--------------------------------------- |
6 | 1r6vA1 | 0.21 | 0.09 | 2.92 | 0.86 | FFAS-3D | | GKILVGYNDR------------------SEVDKIVKAVNGKVVLEL-----------PQIK---VVSIKLN-GMTVKQAYDKIKALKGIRYVEPSY---------------------------------------------- |
7 | 1r6vA | 0.16 | 0.12 | 4.00 | 0.98 | HHpred | | GKILVGYNDR------------------SEVDKIVKAVNGKVVLEL-P-------------QIKVVSIKLNG-MTVKQAYDKIKALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG |
8 | 2l69A | 0.13 | 0.11 | 3.89 | 0.82 | MUSTER | | NIVIVVFSTDLRKFKDIIKKNGFTVRSPQELKDSIEELVATIVVVVVDDKEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRR-GFE----VRTVTSPDDFKKSLERLIREVGSLEHHHHHH----------------- |
9 | 5vlaA | 0.20 | 0.11 | 3.39 | 1.00 | CNFpred | | GTYVVVLKEETHLSQSER--------TARRLQAQAARRGYLKILHVFH------------GLLPGFLVKMSG-----DLLELALKLPHVDYIEEDSSVFAQ----------------------------------------- |
10 | 1r6vA1 | 0.21 | 0.09 | 2.92 | 1.49 | HHsearch-2 | | GKILVGYNDREV-------------------DKIVKAVNGKVVLEL--------------PQIKVVSIKLNGM-TVKQAYDKILALKGIRYVEPSYK--------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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