Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GNKVKYEGSGKSGLWMSNLEKSDKTSIGPNYFLNLYWQGSKKEEKWTVVERITLYVDGEKYQDDNVDEYDLSEYTGDEMPGGGRMEDHISTFDYMPEDEVIGHDVLVKVEWRTGQKKQTEAIKLHKKPWYK |
1 | 4kkpA1 | 0.13 | 0.11 | 3.95 | 0.75 | SPARKS-K | | -------------VIEANLSLNQNASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVGVDTAQQESDALTDGRNVTRGFWVPEYAD------GKYTVSLQVVAENKVFKANQEFVKGVDLN |
2 | 2e9gA | 0.09 | 0.08 | 3.17 | 0.67 | FFAS-3D | | APIPDLKVFEREGV-QLNLSFIRPPENPALLLITITATNFSEGD----VTHFICQ-----AAVPKSLQLQLQAPSGNTVPARGGLPITQLF--RILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLPWQ- |
3 | 1v8hA | 0.11 | 0.08 | 2.77 | 0.26 | HHpred | | --------PKAGEEFRLQVVAQ-----HPNEPGTR-RDAEGKLIPAKYINLVEVYFEGEKVAEA--------RPGPSTS----ANP-LYAF-KFKAE---KAG--TFTIKLKDTDGTGEASVKLEL----- |
4 | 4kkpA1 | 0.14 | 0.12 | 4.17 | 0.89 | MUSTER | | -------------VIEANLSLNQNASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVGVDTAQQESDALTDGRNVTRGF----WVPEYADGKYTVSLQVVAENGKVFKANQEFVKGVDLNS |
5 | 3sikA | 0.12 | 0.08 | 2.71 | 0.79 | CNFpred | | --------------ATLTVKN-------GKQYVSFKVKDS------TSIKSFQVEKDGQFVETTVLSEN---------------KKDNTRVVEFEVADLSKKLNGKVKINIPIINYNASYDIRFVFD---- |
6 | 2k4vA | 0.09 | 0.05 | 1.75 | 0.48 | HHsearch-2 | | --------------------------------------------------QGHMFEPGHLHLVSL----PGLD------QQ----DINIHIRYEVRQNAESGAYVHFDMDGEIDGKPFSDSFELPRDTAFN |
7 | 4kkpA1 | 0.13 | 0.11 | 3.97 | 1.08 | Neff-PPAS | | -------------EANLSLNQNQLASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVGVDTAQQESDALTDGR---LNVTRGFWVPEYADGKYTVSLQVVAENGKVFKANQEFVKGVDLNS |
8 | 3h3iA | 0.19 | 0.14 | 4.45 | 0.66 | HHsearch | | -------AVEKAGDWWVTVNAFIDKEFGAGHLQSTYWLDDLGNKVDNVTYESKVKIDGKVLEKA------------ATTPSG--PADSIVYVQFDDDED--GLTYKVSGFRRTGFPA--DDF--------- |
9 | 4kkpA1 | 0.12 | 0.11 | 3.76 | 0.66 | SP3 | | -------------VIEANLSLNQNASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVGVDTAQQESDALTDGRLNVTRGFWVPEYADGK---YTVSLQVVAENGKVFKANQEFVKGVDLNS |
10 | 4mboA2 | 0.12 | 0.11 | 4.08 | 0.60 | PROSPECTOR2 | | NSPSVTEHDDERQTETYITQINPEASGLGNLYTIIGSDGSPVNLLNAEVK--ILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSISSTTSYVVLVKIPQSGVLYSTVSDINQTYGSN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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