>PF16268 (428 residues) MADGTIKQVNPFSGTQVWTVPGRANRPLTHLPADIHKLTYQDHVSTCAFCSDRQIETPPE KARMVQSSVKKNSDWEILRGVGAEDLYATTAAFRRVPNLFEIVSYDYWHDNYGYSLDSET QARMERYIASDLGRKHVLEIIKTKRKAAGNAVSTDYPENELLKDASAFFGGGHDVIIARR HYTDDATHSDQLASAGTLTYEEHEAFIRFTIDSLRDLYSRNRYAPYVAVFQNWLKPAGAS FDHLHKQLVAVDERGVHSEMEVQKLRQNPNMYNEWAVDFAAMHNLVIAENDHAICFAGFG HRFPTLEVFSKSAVSEPWLQSSEEIRDMSDLVHACHAGAGPQVPCNEEWHHKPVDVDIPM PWRIMIKWRVSTLAGFEGGTKIYLNTLSPWDVRDRIVHELYSLRDQGRISPNIRIATECA VQRNSLKY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MADGTIKQVNPFSGTQVWTVPGRANRPLTHLPADIHKLTYQDHVSTCAFCSDRQIETPPEKARMVQSSVKKNSDWEILRGVGAEDLYATTAAFRRVPNLFEIVSYDYWHDNYGYSLDSETQARMERYIASDLGRKHVLEIIKTKRKAAGNAVSTDYPENELLKDASAFFGGGHDVIIARRHYTDDATHSDQLASAGTLTYEEHEAFIRFTIDSLRDLYSRNRYAPYVAVFQNWLKPAGASFDHLHKQLVAVDERGVHSEMEVQKLRQNPNMYNEWAVDFAAMHNLVIAENDHAICFAGFGHRFPTLEVFSKSAVSEPWLQSSEEIRDMSDLVHACHAGAGPQVPCNEEWHHKPVDVDIPMPWRIMIKWRVSTLAGFEGGTKIYLNTLSPWDVRDRIVHELYSLRDQGRISPNIRIATECAVQRNSLKY | |||||||||||||||||||
1 | 1guqA | 0.16 | 0.12 | 3.90 | 2.80 | SPARKS-K | PVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNV----------RVTGDKNPDYTGT----------------YVFTNDFAAL--------------------------------------------MSDTPDAPESHDPLMRC--QSARGTSRVICFSDHSK----------TLPELSVAALTEIVKTWQEQTAELGKTY---PWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYFAEQLVDYVQRELADSRTVVETEHWLAVVPYWAAWPETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDCSFPYSMGWHGAPFNGEQHWQLHAHFYPPRKFMVGYEMLAE-TQRDLTAEQAAERLRAVHFRESGV---------------------- | |||||||||||||
2 | 1guqA | 0.16 | 0.12 | 3.97 | 2.84 | FFAS-3D | -VDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTG-----------------------------------------------------------------------TYVFTNDFAALMSDTPDAPESHD-PLMRCQSARGTSRVICFSP---------DHSKTLPELSVAALTEIVKTWQEQTAELGKT---YPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYQCSFPYSMGWHGAPFNGEENWQLHAHFYPPLKFMVGYEMLAET-QRDLTAEQAAERLRAVSDIFRESG--------------------- | |||||||||||||
3 | 1guqA | 0.17 | 0.13 | 4.22 | 6.89 | HHpred | PVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTG-DK-----N----PDYTG----------------TYVFTNDFAALMSDT------PDA-------------P-------------------------ESHDPLMRCQS--ARGTSRVICFSDHSK----------TLPELSVAALTEIVKTWQEQTAELGK---TYPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYFAMLVD-YVQRELDGSRTVVETEHWLAVVPYWAAWPETLLLPKAHVLRITDLTDAQRSDLALALKKLTSLFQCSFPYSMGWHGAPFNGNQHWQLHAHFYPPLLFMVGYEMLAETQ-RDLTAEQAAERLRAVSDIHFESG--------------------- | |||||||||||||
4 | 2h39B | 0.22 | 0.16 | 4.94 | 2.44 | MUSTER | --QSPELRKDPVTNRWVIFSPARAKRPTDF-------------PSSCPFCIGREQECAPELFRVP----DHDPNWK----------------LRVIENLYPALSRNLETQSTRTIVG----------------------------------------------------FGFHDVVIES---------PVHSIQLSDIDPVGIGDILIAYKKRINQIAQ-HDSINYIQVFKNQGASAGASMSHSGSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIANDPPYNYMIHTSPLKVTPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSLT-------------------------- | |||||||||||||
5 | 1z84A | 0.21 | 0.15 | 4.74 | 2.84 | CNFpred | ---SPELRKDPVTNRWVIFSP----RPTDFKSKS---------PSSCPFCIGREQECAPELFRVPD--------------------HDPNWKLRVIENLYPALSRNLETQ--------------------------------------------------------IVGFGFHDVVIESPVH---------SIQLSDIDPVGIGDILIAYKKRINQIAQH-DSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIANDPPYNYMIHTSPLKVLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSLT-------------------------- | |||||||||||||
6 | 2h39B | 0.23 | 0.16 | 5.05 | 2.99 | HHsearch-2 | --QSPELRKDPVTNRWVIFSPARAKRPTDF-------------PSSCPFCIGREQECAPELFRVPDH----DPNWK----------------LRVIENLYPALSRNL------------E--------------------------------------TQSTRTIV--GFGFHDVVIESVHSI----------QLSDIDPVGIGDILIAYKKRINQIAQ-HDSINYIQVFKNQGASAGASMSHSGSQMMALPVVPPTVSSRLDGTKDYFECLCE-AKSK----HFVIDESSHFVSVAPFAATYPEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQQLN-DPPYNYMIHTSPLKVTPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSLT-------------------------- | |||||||||||||
7 | 2h39B | 0.22 | 0.15 | 4.88 | 3.86 | Neff-PPAS | --QSPELRKDPVTNRWVIFSPARAKRPTDF-------------PSSCPFCIGREQECAPELFRVPD--------------------HDPNWKLRVIENLYPALSRNLETQSTRTIV----------------------------------------------------GFGFHDVVIE---------SPVHSIQLSDIDPVGIGDILIAYKKRINQIAQ-HDSINYIQVFKNQGASAGASMSHSGSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKDPPYNYMIHTSPLKVTPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSLT-------------------------- | |||||||||||||
8 | 2h39B | 0.23 | 0.16 | 5.05 | 4.82 | HHsearch | --QSPELRKDPVTNRWVIFSPARAKRPTDF-------------PSSCPFCIGREQECAPELFRVPDH----DPNWK----------------LRVIENLYPALSRNL------------E--------------------------------------TQSTRTIV--GFGFHDVVIESVHSI----------QLSDIDPVGIGDILIAYKKRINQIAQ-HDSINYIQVFKNQGASAGASMSHSGSQMMALPVVPPTVSSRLDGTKDYFECLCE-AKSK----HFVIDESSHFVSVAPFAATYPEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQQLN-DPPYNYMIHTSPLKVTPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSLT-------------------------- | |||||||||||||
9 | 1guqa | 0.16 | 0.12 | 4.10 | 3.42 | PROSPECTOR2 | TQDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDK--------------------------NPDYTGTYVFTNDFAALMSD-----------------------------------------TPDAPESHDPLMR-----CQSARGTSRVICFSDHSK----------TLPELSVAALTEIVKTWQEQTAELGKT---YPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYFAMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPETLLLPKAHVLRITDLTDAQRSDLALALKKLTSLFQCSFPYSMGWHGAPFNGEQHWQLHAHFYPPLKFMVGYEMLAET-QRDLTAEQAAERLRAVSDIHFRESGV------------------- | |||||||||||||
10 | 1guqA | 0.18 | 0.13 | 4.12 | 4.59 | SAM | --DHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTG-DK----------PDYTG----------------TYVFTNDFAALMSDT------------------------------------------------ESHDPLMRCQS--ARGTSRVICFSDHSK----------TLPELSVAALTEIVKTWQEQTAELGK---TYPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYFAMLVD-YVQRELDGSRTVVETEHWLAVVPYWAAWPETLLLPKAHVLRITDLTDAQRSDLALALKKLTSLFQCSFPYSMGWHGAPFNGNQHWQLHAHFYPPLLFMVGYEMLAETQ-RDLTAEQAAERLRA------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |