>PF16263 (311 residues) ILLGNGASIAVSPSFSYGSLLRHAVEQRFLPDDAQRLFQFFQTNDFELVLRIVWQASNVN RSLQIPDHRTHAAYVSLRDCLIQTVRNIHPEYDQVSAHLPSIYQFLKRFSTVISLNYDLV VYWVMTYGLEIEDQHAFKDCFIGGGVFSDDWQRFRQPIGRERSTTLVFHAHGSLVLCRNL VEQELKIHNRDAGLLEAILQLWQSESVVPLFVSEGTWQQKVTSIQNSYYLSTVYREVLKS PRNTLVVYGWGFSEQDLHLLQRMSGTGINRVAVSVFRGDQAYCNRVFQTIRDTLGWHVEV EFFDSESPGCW |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ILLGNGASIAVSPSFSYGSLLRHAVEQRFLPDDAQRLFQFFQTNDFELVLRIVWQASNVNRSLQIPDHRTHAAYVSLRDCLIQTVRNIHPEYDQVSAHLPSIYQFLKRFSTVISLNYDLVVYWVMTYGLEIEDQHAFKDCFIGGGVFSDDWQRFRQPIGRERSTTLVFHAHGSLVLCRNLVEQELKIHNRDAGLLEAILQLWQSESVVPLFVSEGTWQQKVTSIQNSYYLSTVYREVLKSPRNTLVVYGWGFSEQDLHLLQRMSGTGINRVAVSVFRGDQAYCNRVFQTIRDTLGWHVEVEFFDSESPGCW | |||||||||||||||||||
1 | 1s5pA | 0.15 | 0.10 | 3.44 | 1.06 | HHsearch-2 | VLTGAGISAESGRTFRAAGLWEE--------------------HRVEDVATPEGFDR--------DPELVQAFYNAR----RRQLQEIQPNA--AHLALAKLQDALGDRFLLVTQNIDNLHERA----GN----------------------------------TNVIHMHGELLKVRCSQSGQV-LDWTGD-VT-P-EDKC--P-LRPHVVWFGEM---------PLGMDEIYMAL--SMADIFIAIGTSG--HVYPAAGFVHELHGAHTVELNLEPSQEPASQVVPEFVEKLLKGLK------------ | |||||||||||||
2 | 5oj7A | 0.12 | 0.08 | 2.75 | 1.12 | HHsearch | VMTGAGISTESGPDYRSEGLYSRTER---------------RPIQHSEFVQSQAARRRY-----------------WARNFWPSFSSHEPNS-----AHVNLCKWERRLHWLVTQNVDALHTKA----GQ----------------------------------CRLSELHGCTHRVICLGCQTVTKRS---ELQERFCTKCG-GILKPQVTFFGD-------TVNRGFVFSIYEQ-M-KQADAMLIVGSSL--QVYSGYRFALNELHLPIAILNIGPTRAD---------HLAK----VKVSARCGLPI- | |||||||||||||
3 | 5kcnA | 0.09 | 0.08 | 3.06 | 0.61 | SPARKS-K | DRALIEARISAAKN-ANEVAQNQLRALDLLSPSQKSRYYETLAIVAENMIEAVKARIEMDKNLT-DVQRHQDNIDKTWALLRSAINNASDENAALGGWLTLIKAYNDYIRQ-----PVQLSQALQSWKNAYPN-------HAAATLFPKELLTLLN--FQQTNVSQI-----GLLLPLSGDGPVQVFDTSMNS-VQDIIAQAKQAG-IKTLVGPLLK----------QNLDVILADPAQIQGMDVLALNCYYGLSAESAANKMWNDGVRNPLVAMPQNDQRVGNAFNVRWQQLAGTDANIRYYNLPADVTY | |||||||||||||
4 | 5a3aA | 0.11 | 0.08 | 2.91 | 0.79 | FFAS-3D | LVVGAGMSAADGFTYIGPRFETA----------FPDFIAKYQFLDMLQASL-----------FDFED---WQEYWAFQSRFVALNYLDQPVGQ----SYLDLKEILETKDYIITTNADNAFWVA---------------GYDPH---------------------NIFHIQGEYGLWQCSQHCHQQTY-KDDTVIRQMIAEQKNGQLIPFEINKRNEEKGMVEDADFHAQKARYEAFLSEHKEGYLEIGVGHQFIKHPFWKRVSENPNALFVTLNHKHYTEHIAQLISATKTIYQK--------------- | |||||||||||||
5 | 5oj7A | 0.12 | 0.07 | 2.61 | 0.65 | HHpred | VMTGAGISTESGPDYRSEGLYSRTERR---------------PIQHSEFVQSQAARRRY-----------------WARNFWPSFSSHEPNS-----AHVNLCKWERALHWLVTQNVDALHTKAGQ--------------------------------------CRLSELHGCTHRVICLGCQTVTK-RS--ELQERFLTKCG-GILKPQVTFFGD-------TVNRGFVFSIYEQM--KQADAMLIVGSSL--QVYSGYRFALNELHLPIAILNIGPTRAD----------------------------- | |||||||||||||
6 | 2wdeA1 | 0.08 | 0.07 | 2.80 | 0.67 | MUSTER | LYF--GQAFPHYFMEPPNLIAPKPLMGRPGYLTGEAILRYYGVGTPLAYLLSYVDFVELARTFGPGMGALTALIRDQKARVEAE---WTNSGLSLLTRGEAVVRWQNLVGDHMVSHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERLQEAVDKARAEGANAVVLLNG---------------MQLDAALAERIRGILILSGDLTPRPWRWIVAG---AAGKALMRVDLKLWKGGIANLR----------VRVLPVLAEHLPK- | |||||||||||||
7 | 5h8wA | 0.11 | 0.09 | 3.36 | 0.77 | CNFpred | IILDEAHNL-------PDIGRSIGSFRISVLNRADREAQAYG-IHVSDLIEMIRSALQSMVSERCGKGDVRIRFQEFMEYMRIMNK---RSEREIRSLLNALYLFGEYVENEPFSYASSVASRIIAFSDQDEEKYAAILSP--------------------GGYMQAAALDPILEVLK---ESKTIHMSGTLDPFDFYSDITGFEENRYIAYYDGVSSYDTLDEKELDRMATVIEDIILVKKNTIVYFP------SYSLMDRVENRVSFEHMKEYRGIDQKELYSMLKKFRRD----HGTIFAVS------ | |||||||||||||
8 | 2h59A | 0.12 | 0.08 | 2.83 | 0.99 | HHsearch-2 | TLTGAGISTPSGPDFRGPGIYKK--Y-------SQNV------FDIDFFYSHP-----------------EEFYRFAKE-GIFPMLQAKPN-----LAHVLLAKLEELIEAVITQNIDRLHQRA----GS----------------------------------KKVIELAGNVEEYYCVRCEKK-YTVE--DVIKKLEDDCN-SLIRPNIVFFGE-------NLPQDALREAIGLS--SRASLMIVLGSSL--VVYPAAELPLIRSGGKLVIVNLGETPFDVVEFARRVMEEGG-IS------------- | |||||||||||||
9 | 6ezvX | 0.09 | 0.08 | 2.98 | 0.78 | Neff-PPAS | SIPSSVINFDATFQASIDAIHELYKADPTASGKDNTTVQQA-SQIMTALSSQVSGIEATVKGMNKELSDWGVKMQAAHDDLVNGATNIQKTIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYA------QVAVGVGIFMLVAGVALTVATAGTA-------------AAVSGGIAAVGAAGVTWGVLQNQIDDDYDSIAQEQKQKA---------EDQQQIIALQGLSNASSAVVSAIETSTSVLSDFETTWTVFGNELDDVVTKLNNGASMQSIIMEKKNEWDDAVELAKQLASAKIAIETKELAPAV-- | |||||||||||||
10 | 1s7gA | 0.18 | 0.12 | 3.88 | 1.12 | HHsearch | VFTGAGISAESGPTFRGDGLWRKY--------------------DPEEVASISGFKR--------NPRAF---WEFSME-MK-DKLFAEP---NPA--HYAIAELERIVKAVITQNIDMLHQRA----GS----------------------------------RRVLELHGSMDKLDCLDCHET-YDWS--EFVEDFCRKCGSYYVKPRVVLFGE-------PLPQRTLFEAIEEA--KHCDAFMVVGSSL--VVYPAAELPYIKAGAKMIIVNAEPTMADAGEVLPKIVEEVKRLSE------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |