Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IFKLVNGEEVLGKAILTQDETETLVFIQDPVCVQVVTRESEDGKVTRGMGFTKWMQLSEEDFYIIREKDIITVSSMSKEVIFMYE |
1 | 3by7D | 0.20 | 0.18 | 5.64 | 1.78 | SPARKS-K | | KIRLVTGEDIIGNISESQGL----ITIKKAFVIIP-------QGKPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
2 | 3by7D | 0.21 | 0.18 | 5.61 | 1.25 | FFAS-3D | | -IRLVTGEDIIGNISESQG----LITIKKAFVII-------PQGKPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSY- |
3 | 3by7D | 0.22 | 0.19 | 5.95 | 1.37 | HHpred | | KIRLVTGEDIIGNI--SESQG--LITIKKAFVII----PQ--G-KPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
4 | 3by7D | 0.22 | 0.19 | 5.95 | 2.36 | MUSTER | | KIRLVTGEDIIGNISESQG----LITIKKAFVIIPQGKPVQ-------LVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
5 | 3by7A | 0.23 | 0.20 | 6.26 | 1.48 | CNFpred | | IMRLVTGEDIIGNISESQ----GLITIKKAFVIIPMQ--------PVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
6 | 3by7D | 0.20 | 0.18 | 5.64 | 2.63 | HHsearch-2 | | KIRLVTGEDIIGNISES----QGLITIKKAFVIIPQG-------KPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
7 | 3by7D | 0.22 | 0.19 | 5.95 | 2.46 | Neff-PPAS | | KIRLVTGEDIIGNISESQG----LITIKKAFVIIPQGKPVQ-------LVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
8 | 3by7D | 0.19 | 0.16 | 5.31 | 4.25 | HHsearch | | KIRLVTGEDIIGNISES----QGLITIKKAFVIIPQG-------KPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSY- |
9 | 3by7A | 0.22 | 0.19 | 5.93 | 0.78 | PROSPECTOR2 | | KIRLVTGEDIIGNISESQG----LITIKKAFVII---------PQPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
10 | 3by7D | 0.22 | 0.19 | 5.95 | 0.78 | SAM | | KIRLVTGEDIIGNI-S---ESQGLITIKKAFVIIPQG-------KPVQLVLSPWQPYTDDKEIVIDDSKVITITSPKDDIIKSYE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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