Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | IVGAYASLPFDRRDQETYYSLLAEQAWINGLEIPFPGDLTESLPWLSGQIADHWDANTITAIPGTMVNVGKNPAFGLASADEDGRAAALEFTDRICKAVQELASRTGRSVIKYVQLHSAPTRGAHSDAFARSLDEIATWNWSSARIVIEHCDAPREDHEPEKGFLELADECAIAADHGVKLHINWGRSCLEDRDATTPLQHITTARDKGVLSGVMFSGAGDKDTQYGYPWVDGHLPAYPDEPTSWMTPDRIRECAHAALGTPEVYLGAKVCVPSDSSLNGRVAM |
1 | 2i57C1 | 0.14 | 0.09 | 2.99 | 1.06 | FFAS-3D | | ---------------------------------------------------------------------GQAHSYGLSHTNAATRAQAVEHNLECIEIGKAI----GSKALT---VWIGSNFTRAFERYLSAMAEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLVD----LGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYG---------DDDLDAGAIEPYRL---FLVFNELVDAEGFHPAHM------------------ |
2 | 3ktcA | 0.14 | 0.12 | 3.98 | 1.28 | CNFpred | | --------------TIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDA--GLKAIGITPEIYLQ-KWSRGAFTNPDPAARAAAFELMHESAGIVRELG-----ANYVKVWPGQDGWD-NLWKLAVDGMRDLAGA-NPDVKFAIEYKPRE----PRVKMTWSAARTLLGIELDNVGVLLDFGHALYGGE---SPADSAQLIIDRGRLFGMDVNDNLR--------GWDDDLVVGTV------HMTEIFEFFYVLKINWQGVWQLDQFPFRENHVEAAQLS |
3 | 2qw5A2 | 0.16 | 0.07 | 2.46 | 1.06 | HHsearch | | --------------------------------------------------------------------VGATRTFDPSSNYPEQRQEALEYLKSRVDITAAL----GGEI---GPIVIPYGVEVRYANAQPILDKLGEYEIKKVKLAIEPITHW------ETPGPKLSQLIEFLKSKQVGVVIDSAHEILDGEGPE-IFKQVEYLAQQGRLHY----------------------------------------------------------------------- |
4 | 2x7vA | 0.14 | 0.12 | 4.21 | 1.04 | PROSPECTOR2 | | KIGAHMPISKGFD---RVPQDTVNIG-GNSFQIFPHNARSWS--------AKLPSDEAATKFKREMKKHGSGYLINLASPKDDIWQKSVELLKKEVEICRKL-----GIRYLNIHPGSHLGTGEEEDRIVRGLNEVLN-NTEGVVILLENVSQKGGNIGY-----KLEQLKKIRDLVDVAITYDTCHGFDSGYDITKKLNEIESLFGLERLKMIHLNDSKYPLGAAK----DRHERIGSGF----IGEEGFAVFFSFKEIQEVPWI---LETPGGNEEHAEDIE |
5 | 1qtwA | 0.13 | 0.11 | 3.93 | 0.94 | SPARKS-K | | YIGAHV---SAAGGLANAAIRAAEID-ATAFALFTKNQRQWTIDEFKAACEKYYTSAQILPHDS--------YLINLGHPVTEALEKSRDAFIDEMQRCEQL----G---LSLLNFHPGSHLMSEEDCLARIAESINIAKTQGVTAVIENTAGQG-----SNLGFKFEHLAAIIDGVEVGVCIDTCHAFAAGYDLRTCEKTFADFARTVGLRGMHLNDAKSTFGSR----VDRHHSLGEGN----IGHDAFRWIMQDDRFDGI-PLILETINPDIWAEEIAWLK |
6 | 4gjiA1 | 0.13 | 0.08 | 2.80 | 1.05 | FFAS-3D | | ----------------------------------------------------------------------QAHSYSLSHTNAATRAQAVEHNLECIEIGKAI----GSK---ALTVWIGSNFTRAFERYLSAMAEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLVD----LGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYG---------DDDLDAGAIEPYRL---FLVFNELVDAEGFHPAHM------------------ |
7 | 2zvrB | 0.12 | 0.10 | 3.59 | 0.66 | HHpred | | KLSLVISTSDFKGDLRKGMELAKRVG-YQAVEIAVRDP--SIVNEVKILSEE-L-NLPICAIGTGQA--YLADGLSLTHPNDEIRKKAIERVVKHTEVAGMF----G---ALVIIGLRGRREGRSEELFIESMKRLLELTE-HAKFVIEPLNRY------ETDFINTIDDARILRSNRVGILADTFHMNIEEVN---IPESLKRAG--EKLYHFHVADSN-------------RWAPG----CGHFDFRSVFNTLKEIGY--NRYVSVECLP-LPGGMEEAAE- |
8 | 5zhzA | 0.14 | 0.12 | 3.97 | 0.90 | MUSTER | | LIGSHVSP-------TDPLAAAEAE-GADVVQIFLGNPQSWKAP-DAAALKAA--PIYVHA----------PYLINLASANNRVRIPSRKILQETCAAAADIG-------AAAVIVHGGVADDNDIDKGFQRWRKALDRLETEVPVYLENT--AGGDHAMARRFDTIARLWDVIGDTGIGFCLDTCHTWAAGEALTDAVDRIKAITG--RIDLVHCNDSRDEAGSG----RDRHANLGSGQ----IDPDLLVAAVKAAG----APVIC---TADQG-RKDDIAF |
9 | 3ju2A | 0.10 | 0.09 | 3.35 | 1.25 | CNFpred | | GLSINLATIREQCGFAEAVDICLKH-GITAIAPWRDQVAAIGLGEAGRIVRAN--GLKLTGLCRGG---------FFPAPDASGREKAIDDNRRAVDEAAELG-------ADCLVLVAGGLIDAARRMVVEGIAAVLPHAAAGVPLAIEPLHPMYA--ADRACVNTLGQALDICEGPGVGVAIDVYHVWWDP----DLANQIARAGKMKAILAHHICDWLVPTK----DMLTDRGMMG----DGVIDLKGIRRRIEAAGF--HGAQEVEIFSAWKRPADEVIAT |
10 | 3p14A | 0.10 | 0.08 | 3.16 | 0.82 | HHsearch-2 | | ELGDYPGKATTPEELRMDLEKALSIPGKHRVNLHAIYAELEPHEKWVRWAKR-H-GLGLDFNPTLF----SHEKLTLAHPDQAIRQFWIDHCIASRKIGEYFGKELETPCLTNIWIPDTPSDRTPRKRLKESLDQIFAAEIAYNLDAVESK-------LFGIGSESFYLSYALKN--DKLCLLDTGHYHP-TE---TVSNKISAMLLFHDKLALHVSRPV--------RW-DSDHVVTF---DD--ELREIALEIVRNDA--LDRVLIGLDFDASINRIATIGT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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