Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | IEAFVATDEMQSQIKEAKESVEDGTLTMDIVAEGNKLVYVYTYQTDLDIEATKEALATAIEQQASVFENVAKEIKNAVNVENPIVEVRYLAKDGTEIYSQEF |
1 | 4ftfA | 0.09 | 0.08 | 3.03 | 1.13 | SPARKS-K | | GAMAEKQRNLELLAGNRASLLSTELNILRATAKGSTVELMMVYNTDAPTEQVLQSAVSSFCAN----KDIRSNLDVG-----ISYRIQMRNTRGQLMADQLV |
2 | 4ftfA | 0.08 | 0.08 | 3.05 | 1.07 | MUSTER | | MAEKQRNLLAGNRASLLSTEL-GPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDV------ISYRIQMRNTRGQLMADQLV |
3 | 6i2vA | 0.10 | 0.10 | 3.59 | 1.13 | Neff-PPAS | | -KERQLELMASNRAGVLSAGLPGPLKVMRISSSKNIVEIMMIYNTDATGAKPTQELLSTSVSKYCEDATVRNQLDMG-----LMYRIKIRNSRGQLIIDEMV |
4 | 6i2vA | 0.10 | 0.09 | 3.27 | 1.06 | HHsearch | | KERQL-ELMASNRAGVLSAGLPGPLKVMRISSSKNIVEIMMIYNTGAPTQELLSTSVSKYCED-ATVRNQLD--------MGLMYRIKIRNSRGQLIIDEM- |
5 | 6i2vA | 0.10 | 0.09 | 3.26 | 1.04 | SPARKS-K | | --NGEKERQLELMASNRAGVLSGPLKVMRISSSKNIVEIMMIYNAKPTQELLSTSVSKYCED--ATVRNQLDMG--------LMYRIKIRNSRGQLIIDEMV |
6 | 4ftfA | 0.08 | 0.08 | 3.05 | 0.91 | FFAS-3D | | -KQRNLELLAGNRASLLSTELPGPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDV-----GISYRIQMRNTRGQLMADQL- |
7 | 6i2vA | 0.09 | 0.08 | 2.98 | 0.54 | HHpred | | -----LELMASNRAGVLSAGLPGPLKVMRISSSKNIVEIMMIYNTGAPTQELLSTSVSKYCE-DATVRNQLD--------MGLMYRIKIRNSRGQLIIDEMV |
8 | 6i2vA | 0.13 | 0.12 | 4.06 | 0.98 | MUSTER | | ------NGEKERQLELMASNRAGPLKVMRISSSKNIVEIMMIYNTDATGAKPTQELLSTSVSKYCEDATVRNQLDM------LMYRIKIRNSRGQLIIDEMV |
9 | 3npdA | 0.12 | 0.11 | 3.84 | 0.65 | CNFpred | | -GASLKDFELSKMLEKVAKESS-DILDQGYTVEGNQLINHLSVRAS-HAERMRSNPDSVRSQLGDSVCTGYRQLLAR----GAILTYSFTEYTNQPVATERF |
10 | 6i2vA | 0.13 | 0.11 | 3.76 | 0.85 | HHsearch-2 | | ------NGEKERQLELMASGLPGPLKVMRISSSKNIVEIMMIYNTGAPTQELLSTSVSKYCEDA-TVRNQL----D----MGLMYRIKIRNSRGQLIIDEMV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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