Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IYEWGDYQPTVYQYYQQDKTGPQEQIQALQKVIEQARAKDKPVPPGLHAQMGLLYSKTGNIEEAFQQFEIEKKLFPESAQYMDFL |
1 | 6evlA | 0.12 | 0.12 | 4.15 | 1.20 | SPARKS-K | | MLSVDDCFGMGRSAYNEG--DYYHTVLWMEQVLKQLDAGETTTKSQVLDYLSYAVFQLGDLHRALELTRRLLSLDPSHERAGGNL |
2 | 2xpiA3 | 0.12 | 0.12 | 4.12 | 1.56 | MUSTER | | ----SNEKPWAATWANGHAYRKLKMYDAAIDALNQGLLL-STNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLL |
3 | 6evlA | 0.12 | 0.12 | 4.14 | 1.34 | Neff-PPAS | | -LSVDDCFGMGRSAYNEG--DYYHTVLWMEQVLKQLDAGETTTKSQVLDYLSYAVFQLGDLHRALELTRRLLSLDPSHERAGGNL |
4 | 2xpiA3 | 0.14 | 0.13 | 4.41 | 1.16 | SPARKS-K | | KPWAATWANLGHAYRKL--KMYDAAIDALNQGLLLS-----TNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLL |
5 | 3zgqA2 | 0.17 | 0.16 | 5.42 | 0.95 | FFAS-3D | | -FHRKSENTAIHHYVKDRSPLRTKLTSALKKLSTKRLCHNALDV-QSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTAL |
6 | 4uzyA | 0.26 | 0.24 | 7.26 | 0.71 | HHpred | | -IAEGQYTQTIYTLIKEQ--KFAEAIQHLQ--YQLQ---NVPESRAALSLLGYCYYYTGQYDMASQMYEQLVTLYPSNEDYKLYY |
7 | 5xw7A1 | 0.18 | 0.16 | 5.36 | 1.54 | MUSTER | | ----PTAQQQLLSQV--RLGEATKREDLVRQSLYRLELID-PDNPDVIAARFRYLLRQGDNAGAQKQLDRMKQLAPDSAAYKSSV |
8 | 5a31J | 0.16 | 0.14 | 4.71 | 0.68 | CNFpred | | -------HEVGVVAFQNG--EWKTAEKWFLDALEKIKAIGVTVWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAI |
9 | 3pe3A | 0.21 | 0.19 | 6.00 | 0.29 | HHsearch-2 | | KREQGNIEEAVSVLQQQG--KLQEALMHYKEAIRI-----SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNL |
10 | 2v5fA | 0.11 | 0.11 | 3.82 | 1.33 | Neff-PPAS | | -LTAEDCFELGKVAYTEA--DYYHTELWMEQALRQLDEGEISTIVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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