Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | AKEVSGVQVAETVTLDSQTLQLNGAGVRSKFFMDLYVGSLYLPAALSSTAAVIDAPVAAIRLNITSGMITSEKMRDAITEGFEQATAENTADIQPQIDTFMALFKEEIKEGDQFTLVANKARGVTAYKNGQEQATIEGEMFRQALLKIWLGDKPAQKSLKEAMLG |
1 | 4dooA | 0.21 | 0.21 | 6.55 | 2.96 | SPARKS-K | | SVVETGFSFPASIG---DSRRLLGVGLRKKSLIDVYAFGVYADGNKSFMDDLMEADKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGDNDELLQSFTSLFKDEIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLD |
2 | 4dooA | 0.21 | 0.20 | 6.35 | 2.46 | FFAS-3D | | ----TGFSFPASI---GDSRRLLGVGLRKKSLIDVYAFGVYADGNKSFMDDLMEADKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKGGSDNDELLQSFTSLFKDKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFL- |
3 | 4dokA | 0.15 | 0.15 | 4.92 | 2.75 | HHpred | | MVMVHEVPFPPQII-TSKPLSLLGQGITDIEQVKFTAIGVYLDPSVKTFDALASAEEKVIRVVVIKE-IKGAQYGVQLENTVRDRLAEYEEEEETELEKVVGFFQKYFKANSVITYHFSAKDEIGFETEGKEEEKVENANVVGMMQRWYLSGSRVSPSTIVSIAD |
4 | 4dooA | 0.20 | 0.20 | 6.38 | 2.56 | MUSTER | | VEPKTGFSFPASIG---DSRRLLGVGLRKKSNIDVYAFGVYADGNKSFMDDLMEADKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGDNDELLQSFTSLFKDKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLD |
5 | 4dooA | 0.20 | 0.19 | 6.21 | 1.79 | CNFpred | | VEPKTGFSFPASIG---DSRRLLGVGLRKKSNIDVYAFGVYADCD-SFMDDLMEAIKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGSDNDELLQSFTSLFEYKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLD |
6 | 4dolA | 0.22 | 0.22 | 6.88 | 2.44 | HHsearch-2 | | EETATSVKFKRSVTLPSSPLSLLGTGFREKKFVKVYAAGYYVNESIRSADSIFQAQEKSLQIVLVRD-VDGKTFWDALDEAISPRIKSPSSEDTTALSTFCCIFQRPLNKGSVILLTWINTSNMSVSSGGLPTATIESGNVTSALFDVFFGDSPVSPTLKSSVAN |
7 | 4dooA | 0.20 | 0.20 | 6.38 | 3.02 | Neff-PPAS | | VEPKTGFSFPASIG---DSRRLLGVGLRKKSLIDVYAFGVYADGNKSFMDDLMEADKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGDNDELLQSFTSLFKDKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLD |
8 | 4dolA | 0.22 | 0.22 | 6.88 | 3.74 | HHsearch | | EETATSVKFKRSVTLPSSPLSLLGTGFREKKFVKVYAAGYYVNESIRSAVSIFQAQEKSLQIVLVRD-VDGKTFWDALDEAISPRIKSPSSEDTTALSTFCCIFQRPLNKGSVILLTWINTSNMSVSSGGLPTATIESGNVTSALFDVFFGDSPVSPTLKSSVA- |
9 | 4dooA | 0.21 | 0.21 | 6.55 | 2.02 | PROSPECTOR2 | | ESVVEGFSFPASI---GDSRRLLGVGLRKKSLIDVYAFGVYARGNKSFMDDLMEADKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKGGSDNDELLQSFTSLFKYKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLD |
10 | 5yx4A | 0.22 | 0.22 | 6.88 | 1.88 | SAM | | -LEVDGVVFPSLARPPGHSHFLAGAGVRGMNFIKFTAIGVYLQADAVSARDVVTGEEKFTQVTMILP-LTGAQYSEKVTENCVAYWKAYTDAEAAAVDKFKEAFKETFPPGASILFTHSPAGVLAFSKNSSGGAAIENRPLCEAVLEAIIGEHGVSPAAKLSLAT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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