Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PHNCYEIGHTWSPSCVQSAADVTRSALEVSFKIYAPLYLIAAVLRRRKKDYYFKRLIPEIFWSTSFLTTNGGLFIVFFCILRRLLGGFYSWSVGFGSALPASYIAILLERKSRRGLLTIYMANLATETLFRMAV |
1 | 5xtcV | 0.12 | 0.11 | 3.96 | 1.22 | FFAS-3D | | PKVFRQYWDPDGTDCHRKAYSTTSIASVAGLTA----AAYRVTLNPPG---TFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREKPDDPLNYFLGGCAGGLT-LGARTHNYGIGAAACVYFGIAASLVKMGR |
2 | 5xtcV | 0.12 | 0.11 | 3.96 | 1.41 | HHsearch-2 | | PKVFRQWDIPDGTDCHRKAYSTTSIASVAGLT----AAAYRVTLNP--PG-TFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREPDDPLN-YFLGGCAGG-LTLGARTHNYGIGAAACVYFGIAASLVKMGR |
3 | 5xtcV | 0.12 | 0.11 | 3.95 | 1.48 | HHsearch | | PKVFQYWDIPDGTDCHRKAYSTTSIASVAGL----TAAAYRVTLNPPG---TFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREPDDPLN-YFLGGCAGG-LTLGARTHNYGIGAAACVYFGIAASLVKMG- |
4 | 5cwjA | 0.11 | 0.11 | 4.01 | 0.87 | SPARKS-K | | RRILKEARKSGTEESLRQAIEDVAQLAKDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGSE-EALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESARRQAE |
5 | 5gupV | 0.13 | 0.11 | 3.90 | 1.20 | FFAS-3D | | ---------PEGTECHRKAYASTSIGGATGLIV----SAYSIALKPPAS---FLEGVARTGRYTFTSAAIGAIFGLTSCISAQVREKPDDPLNYFIGGCAGGLT-LGARTRSYGIGAAACAYMGLTAALVKMGQ |
6 | 5xtcV | 0.12 | 0.11 | 3.96 | 0.66 | HHpred | | PKVFRQWDIPDGTDCHRKAYSTTSIASVAGLTA----AAYRVTLNPPG---TFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREPDDPLN-YFLGGCAGG-LTLGARTHNYGIGAAACVYFGIAASLVKMGR |
7 | 6idfB | 0.13 | 0.13 | 4.39 | 0.74 | MUSTER | | GCLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYR-----CYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMISIHWKGPLRLQQAYLIMISALMALVFIK |
8 | 4he8F | 0.09 | 0.07 | 2.84 | 0.81 | CNFpred | | ----------------TPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTIS-----QLGYMFLAAGVGAYWVALFHV--FTHAFFKALLFLASGSVIHALG |
9 | 5gupV | 0.14 | 0.13 | 4.34 | 1.34 | HHsearch-2 | | LHKYSDI--PEGTECHRKAYASTSIGGATGL----IVSAYSIALKPP-A--SFLEGVARTGRYTFTSAAIGAIFGLTSCISAQVREPDDPLN-YFIGGCAGG-LTLGARTRSYGIGAAACAYMGLTAALVKMGQ |
10 | 5xtcV | 0.12 | 0.10 | 3.70 | 0.78 | Neff-PPAS | | --------IPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLN-------PPGTFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREKPDD-PLNYFLGGCAGGLTLGARTHNYGIGAAACVYFGIAASLVKMGR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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