Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | CKAKGIPICEPEKEEVADVKVISTYFELPRVKKAKLFQCPQSDSIELIEAISEESEIPATLDEELQIDDIQNEVDRMKLKVSQINLLLGLNTPECPSIDPCLDVDTELKKHLISPEILNLQRNNQKLQQQISQLQLCRKASDLSMNNLTESISADRAAAGNLKKRLGELDSLKRTLEHEQALCGQRYRYMEKDKYDGSDLHPLFASANVNIKRVISKLVPTREYEKQKVQEIKKIQYLNEQCRKLFDYMLESFDKLDA |
1 | 5nenA1 | 0.08 | 0.05 | 2.15 | 1.15 | FFAS-3D | | -----------------------------------------------------------QVQAQAQVDSLRDQYYTTLATEGRLLAER--------DGLSIVTFSPILDAVKDKPRVAEIASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLALEVQRQFAEVNSSIDETV----------GRIGQLQKQLLESQQRI--DQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDL-- |
2 | 5nnvA | 0.13 | 0.11 | 3.74 | 1.18 | MUSTER | | -----------------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRK--------EVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEA-KEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQH |
3 | 5nnvA | 0.12 | 0.10 | 3.40 | 1.46 | Neff-PPAS | | -------------------------------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEA-KEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQH |
4 | 5nnvA | 0.12 | 0.09 | 3.16 | 1.18 | PROSPECTOR2 | | AKE------------------------------------EELAESSAISAKEAK------------IEDTRDKIQALDESVDELQQVL---------------LVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIL |
5 | 3i9yA | 0.11 | 0.09 | 3.35 | 0.96 | SPARKS-K | | -----------------------------------SAMIEARQVSELSTRIISSVQMLSNAQNEQERKEAGRVLFEQLESLLTHIKELGGES----FDSKLLDAESNVQNVINNAELGVTVERKLWLAKEIDTRVEEMRLLSEELEQLTERLHELHLLAFKMLNQIEEARTLVDRIQQIQTAFENNLKIMKRRVVEDPTRSKQMSQLLTELGKRQVVFTILLQQYENNEQSQQLMQKTLELFSELNSTVNKLVDDS-- |
6 | 6ewyA | 0.10 | 0.07 | 2.56 | 1.03 | FFAS-3D | | -----------------------------------------------------------------TIAALIADVAKANQRLQDLSDEVQ---------------AEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATSSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKAS---QDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQA |
7 | 4ll7A | 0.16 | 0.05 | 1.81 | 0.33 | HHpred | | -------------------------------------------------------------------------------------------------------------IESLHDQIDMLTKTNLQLTTQSQNLLSKLELAQSKESKLLENLNLLKNENENLNSIFERKNKKLKELEKDYSELSNRYNEQKEKMDQL------------------------------------------------------------- |
8 | 2yfaA | 0.10 | 0.09 | 3.19 | 1.07 | MUSTER | | ------------GSHMGDIGQLNKDLTDLRIARLQMIANGDDTAAANTLAKLDASKQQAYLATTFKSPENVKLLGELGDTISAYKLSL---------------NKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSANEQAALRQLDAALAD---TDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQ |
9 | 5j1iA | 0.10 | 0.06 | 2.31 | 0.84 | CNFpred | | ------------------------------------------------------------------APTLRSELELTLGKLEQVRSLS--------------------------AIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEA-PELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQ |
10 | 6f1tX2 | 0.09 | 0.03 | 1.17 | 0.47 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVL--------------------------------------------------------------ILERQGHDKDLQLHQSQLELQEVYRQLQGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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