Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DTVVELELSLGDPALFFVDLSDRCGCLLEYSGSAPQPDGTLHMFFTVSGADPDAVVEAAADCPDVAGASLLTEHEDGALVEFALSESSLVSYLAEQGGRTKEITASDGGARLRVDLPQEANVRSVVETVQDRYPGTELLSYHERERPEKTRQEFVA |
1 | 1u8sB | 0.10 | 0.09 | 3.35 | 0.83 | SPARKS-K | | TQHLVITAVGTDRPGICNEVVRQAGCNIIDSRIAMFGK-EFTLLMLISGSPITRVETTLPLLQHDLITMMKRTSPHTVEVYVESDDKKFTQFFAQRQIGMASLSAQTIHIAISARVDSGCNLMQLQEEFDALCLDVQ-GSLNFIKN---------- |
2 | 1u8sB | 0.08 | 0.08 | 3.01 | 0.91 | FFAS-3D | | TQHLVITAVGTDRPGICNEVVRQAGCNIIDSRIAMFGKEFTLLMLISGSPSETTLPLLGQQHDLITMMKRTSPHDHTVEVYVESDDKLFTQFFAQRQIGMASLSAQTIHIAISARVDSGCNLMQLQEEFDALCTALDVGSLNFIKN---------- |
3 | 2f1fA | 0.13 | 0.12 | 4.02 | 0.26 | HHpred | | -ARRILSVLLENESGALSRVIGQRGYNIESLTVAPTDDPTSRMTIQTVGDELEQIEKQLHKLVDVLRVSELGQGREIMLVKIQA-SGEVKRNTEIFRGQIIDV--TPSLYTVQLAG-TSGKLDAFLASIRDVA---KIVEVARSGVVGL------- |
4 | 2f06A | 0.13 | 0.11 | 3.77 | 0.64 | MUSTER | | AVAKQLSIFLENKSGRLTEVTEVENINLSALCIAENAD-FGILRGIVS--DPDKAYKALKDNHF--------AVNITDVVGISCPNVPVLGFLSAEGVFIEYYSFANNVANVVIRPSN----DKCIEVLKEKKV------------DLLAASDLYK |
5 | 5m86A | 0.06 | 0.05 | 2.31 | 0.93 | CNFpred | | DSQAILAGRF---HNDLTVINEKYDLFYLMLPTINE-KKIVSFYIFLQD-HREEIESVLNKF-------NPVIKNGIWKIYLDTELSEPFSTFFGISIVFDMGSMKGGEMLLPVRFISKDALVNSIIDSAGYGENIYLRYIGQNKGFDYSFIAIKL |
6 | 5n7lA | 0.11 | 0.05 | 1.85 | 0.52 | HHsearch-2 | | ------------------------------------------------------------------------------------GQLQAATVIGGPTVSVEQLDFSAGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG |
7 | 1u8sB | 0.12 | 0.11 | 3.88 | 0.95 | Neff-PPAS | | TQHLVITAVGTDRCNEVVRLVTQAGCNIIDSRIAMFGKETLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSTVEVYVESDDKKFTQFFAQRQIGMASLSAQTIHIAISARVDSGCNLMQLQEEFDALCTALDVQGSLNFIKN--------- |
8 | 5n7lA | 0.11 | 0.05 | 1.84 | 0.70 | HHsearch | | ------------------------------------------------------------------------------------GQGQAATVIGGPTVSVEQLDFSAGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIG- |
9 | 5op0B | 0.15 | 0.13 | 4.33 | 0.64 | SP3 | | DGI-------EGEEIYQKRVPQKHPDYL-ETCVVTFPSGRTADALKIT--HPSSIIWAAQM--GTVTLHPCPDTEDELRVDLDPQPGTLKPLLDELGLVGYPKTSGGRGVHVFLRIKPQWDGIALAREVERRAPD---------AVTTSWWKEERG |
10 | 1u8sA | 0.08 | 0.08 | 2.99 | 0.71 | PROSPECTOR2 | | TQHLVITAVGTDRPGICNEVVRQAGCNIIDSRIAMFGKEFTLLMLISGSPSNTTLPLLGQQHDLITMMKRTSPHDHTVEVYVESDDKLFTQFFAQRQIGMASLSAQSNQFAISARVDSGCNLMQLQEEFTALDVQGSLNFIK-------------N |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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